RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 GPC5P78333 572 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 MDM2Q00987 491 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 IL1RL1Q01638 556 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PKP1Q13835 747 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 RASGRF1Q13972 1273 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 CTTNQ14247 550 aaKnown RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 SPARCL1Q14515 664 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 UBE2SQ16763 222 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 ITPRIPL1Q6GPH6 555 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 BEST2Q8NFU1 509 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 SPDYE1Q8NFV5 336 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 TIPINQ9BVW5 301 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PARD6BQ9BYG5 372 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 DBNDD1Q9H9R9 158 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 SUCLA2Q9P2R7 463 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PCDHA6Q9UN73 950 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PCDHA8Q9Y5H6 950 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PALLDQ8WX93 1383 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 PRDM15P57071 1507 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 GPC3P51654 580 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 ALX1Q15699 326 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 USP17L2Q6R6M4 530 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 TRIM72Q6ZMU5 477 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 MYLK4Q86YV6 388 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 CDKL3Q8IVW4 592 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 STRBPQ96SI9 672 aaKnown RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 DNAJC12Q9UKB3 198 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 TRIM33Q9UPN9 1127 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.68□□□□□ -1.34
PGBD4-201ENST00000397766 HECW2Q9P2P5 1572 aa6.68□□□□□ -1.34
PGBD4-201ENST00000397766 GOLGA8MH3BSY2 632 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ASAP2O43150 1006 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 RPS6KA4O75676 772 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SEC31AO94979 1220 aaKnown RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TSPY1Q01534 308 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 YWHAHQ04917 246 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 BBS9Q3SYG4 887 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TRIM55Q9BYV6 548 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 MBD5Q9P267 1494 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SPDYE2BA6NHP3 402 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 COPEO14579 308 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 APOEP02649 317 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SPDYE6P0CI01 402 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 NR5A1Q13285 461 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TMTC4Q5T4D3 741 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 KRT80Q6KB66 452 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ACAD11Q709F0 780 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 WDR75Q8IWA0 830 aaKnown RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 XXYLT1Q8NBI6 393 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ACAP3Q96P50 834 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 LRRC37BQ96QE4 947 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 IP6K2Q9UHH9 426 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 NR3C1P04150 777 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 CD58P19256 250 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 MTMR1Q13613 665 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 LRRC31Q6UY01 552 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ST13P4Q8IZP2 240 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TTLL11Q8NHH1 800 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 MTBPQ96DY7 904 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 DYNLL2Q96FJ2 89 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 CENPKQ9BS16 269 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 PPME1Q9Y570 386 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 PFASO15067 1338 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 FAM187AA6NFU0 413 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ARHGDIAP52565 204 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SF3A3Q12874 501 aaKnown RBP eCLIP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 DRP2Q13474 957 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SKIV2LQ15477 1246 aaKnown RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SLFNL1Q499Z3 407 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 CATSPER4Q7RTX7 472 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 GRAMD1CQ8IYS0 662 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 C7orf31Q8N865 590 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 OR6B3Q8NGW1 331 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 URGCPQ8TCY9 931 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 NSUN6Q8TEA1 469 aaKnown RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 FGD4Q96M96 766 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 MTRQ99707 1265 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 STAP1Q9ULZ2 295 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 AP3B1O00203 1094 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SNX2O60749 519 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SPAG7O75391 227 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 FGGP02679 453 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ZFXP17010 805 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 TAF11Q15544 211 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 AP1ARQ63HQ0 302 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 FRA10AC1Q70Z53 315 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 PODNQ7Z5L7 613 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 SYT2Q8N9I0 419 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 GJD4Q96KN9 370 aaPredicted RBP6.67□□□□□ -1.34
PGBD4-201ENST00000397766 ADAM22Q9P0K1 906 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 OVOS2A0A0G2JMS6 1433 aa6.67□□□□□ -1.34
PGBD4-201ENST00000397766 OVOS2A0A0J9YW53 1432 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms