RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
PTPRD-204ENST00000397606 FOXN1O15353 648 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 RHOBTB3O94955 611 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 CYP3A4P08684 503 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 LACTBP83111 547 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-204ENST00000397606 PTK2Q05397 1052 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.97
PTPRD-204ENST00000397606 MYO1EQ12965 1108 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 EMC2Q15006 297 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 ZNF569Q5MCW4 686 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 TWF2Q6IBS0 349 aaKnown RBP9.02□□□□□ -0.97
PTPRD-204ENST00000397606 REEP2Q9BRK0 252 aa9.02□□□□□ -0.97
PTPRD-204ENST00000397606 PLS3P13797 630 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 CDC25BP30305 580 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 DPYDQ12882 1025 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 SMC1AQ14683 1233 aaKnown RBP9.01□□□□□ -0.97
PTPRD-204ENST00000397606 KYAT1Q16773 422 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 REM2Q8IYK8 340 aaPredicted RBP9.01□□□□□ -0.97
PTPRD-204ENST00000397606 JAKMIP2Q96AA8 810 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 GOLGA8IPA6NC78 632 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 MYMKA6NI61 221 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 GOLGA6L10A6NI86 522 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 GOLGA8JA6NMD2 632 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 PDXKO00764 312 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 SUPT20HL2P0C7V6 817 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 KIAA0753Q2KHM9 967 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 IER5Q5VY09 327 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 DCUN1D2Q6PH85 259 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 GLT1D1Q96MS3 346 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 C17orf75Q9HAS0 396 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 GCNT4Q9P109 453 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 CTTNBP2NLQ9P2B4 639 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 FERP16591 822 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 YBX3P16989 372 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPRD-204ENST00000397606 TEX35Q5T0J7 233 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 ANKRD23Q86SG2 305 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
PTPRD-204ENST00000397606 SHCBP1Q8NEM2 672 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 AFG3L2Q9Y4W6 797 aa9.01□□□□□ -0.97
PTPRD-204ENST00000397606 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 SPOPO43791 374 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 CYP11B2P19099 503 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 GJC1P36383 396 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 PSMC4P43686 418 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 GRIN1Q05586 938 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 TMEM132BQ14DG7 1078 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 KRT31Q15323 416 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 MAP9Q49MG5 647 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 PLA2G4FQ68DD2 849 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 PPP1R3FQ6ZSY5 799 aaPredicted RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 ARMCX2Q7L311 632 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 SH2D3AQ9BRG2 576 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 IFIH1Q9BYX4 1025 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 BAZ2BQ9UIF8 2168 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 EGFRP00533 1210 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 TAL1P17542 331 aaPredicted RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 SHROOM1Q2M3G4 852 aaPredicted RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 TMEM143Q96AN5 459 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 MAF1Q9H063 256 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 TJP1Q07157 1748 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 SLC15A5A6NIM6 579 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 TRPA1O75762 1119 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 CNTN2Q02246 1040 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 FUT2Q10981 343 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 SPRYD7Q5W111 196 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 TRIM49BA6NDI0 452 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 MEIS2O14770 477 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 KPNA6O60684 536 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 POLR2BP30876 1174 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 VSIG10LQ86VR7 867 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 METTL23Q86XA0 190 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 ENGASEQ8NFI3 743 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
PTPRD-204ENST00000397606 C12orf42Q96LP6 360 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 FAM213AQ9BRX8 229 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 SNCAIPQ9Y6H5 919 aa9□□□□□ -0.97
PTPRD-204ENST00000397606 CTAGE15A4D2H0 777 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 FAM86B1E9PN63 330 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 PRKCBP05771 671 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 HOXC6P09630 235 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 FAM86B2P0C5J1 330 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CTAGE8P0CG41 777 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CASP14P31944 242 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CIITAP33076 1130 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 EARS2Q5JPH6 523 aaKnown RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ZNF484Q5JVG2 852 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 TREML2Q5T2D2 321 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CTAGE6Q86UF2 777 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CCDC50Q8IVM0 306 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CTAGE4Q8IX94 777 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 PCSK9Q8NBP7 692 aaKnown RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CYP26B1Q9NR63 512 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 MYH14Q7Z406 1995 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms