RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 STK24Q9Y6E0 443 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 IGKV6-21A0A0C4DH24 114 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 ZBBXA8MT70 800 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 MAFO75444 373 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 CDC25AP30304 524 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 RFC5P40937 340 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 POLGP54098 1239 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 PTPAQ15257 358 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 KRT79Q5XKE5 535 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 CNKSR3Q6P9H4 555 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 SLC7A3Q8WY07 619 aa23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 JPH2Q9BR39 696 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 CELF4Q9BZC1 486 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 CXXC1Q9P0U4 656 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-206ENST00000397408 RARRES1P49788 294 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 DRP2Q13474 957 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 TCTN1Q2MV58 587 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 FBXO47Q5MNV8 452 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 RASIP1Q5U651 963 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 DHX33Q9H6R0 707 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-206ENST00000397408 KDM3AQ9Y4C1 1321 aa23.64■■□□□ 1.38
TSPAN4-206ENST00000397408 MUTP22033 750 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 MARCKSP29966 332 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 MKRN4PQ13434 485 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 LPIN1Q14693 890 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 EMC2Q15006 297 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 ECM1Q16610 540 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 KIZQ2M2Z5 673 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 FOXD4L6Q3SYB3 417 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 PLEKHG4Q58EX7 1191 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 FOXD4L3Q6VB84 417 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 DBF4BQ8NFT6 615 aa23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 ZNF396Q96N95 335 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 MMTAG2Q9BU76 263 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-206ENST00000397408 LAMA2P24043 3122 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 XRCC6P12956 609 aaKnown RBP eCLIP23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 DNM2P50570 870 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 GRIN1Q05586 938 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 LRIT3Q3SXY7 679 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 TSHZ1Q6ZSZ6 1077 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 EXOC8Q8IYI6 725 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 SEPT8Q92599 483 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 OSMRQ99650 979 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 IFIH1Q9BYX4 1025 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 DDX19AQ9NUU7 478 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 KIAA1024Q9UPX6 916 aa23.63■■□□□ 1.37
TSPAN4-206ENST00000397408 LOXHD1Q8IVV2 1947 aa23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 BAIAP3O94812 1187 aa23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 ZRSR1Q15695 479 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 ZNF668Q96K58 619 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 AK8Q96MA6 479 aa23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 CDHR5Q9HBB8 845 aa23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 SUCLA2Q9P2R7 463 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 DBR1Q9UK59 544 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-206ENST00000397408 USO1O60763 962 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 GPR32O75388 356 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 BRD1O95696 1058 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 LONP1P36776 959 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 GPC3P51654 580 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 NLRP11P59045 1033 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 TMEM143Q96AN5 459 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 SCLT1Q96NL6 688 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 MTRQ99707 1265 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 AGO3Q9H9G7 860 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 ATP6V0A4Q9HBG4 840 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 TFIP11Q9UBB9 837 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 DAXXQ9UER7 740 aaPredicted RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 FBXO2Q9UK22 296 aaPredicted RBP23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 SLC4A7Q9Y6M7 1214 aa23.61■■□□□ 1.37
TSPAN4-206ENST00000397408 GAS2O43903 313 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 DGAT1O75907 488 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 CD52P31358 61 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 CRYBB1P53674 252 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 IKBKEQ14164 716 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 SLC39A14Q15043 492 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 STK38Q15208 465 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 USP38Q8NB14 1042 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 TMEM40Q8WWA1 233 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 ADAMTS10Q9H324 1103 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 XPNPEP1Q9NQW7 623 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 ZDHHC9Q9Y397 364 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 SQORQ9Y6N5 450 aa23.6■■□□□ 1.37
TSPAN4-206ENST00000397408 ABHD14A-ACY1A0A1B0GW23 586 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 ARHGEF35A5YM69 484 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 SOX1O00570 391 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 KCNJ6P48051 423 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 PAK2Q13177 524 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 FAM109BQ6ICB4 259 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 CABP7Q86V35 215 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 RHPN2Q8IUC4 686 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 ZNF710Q8N1W2 664 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 NLRP7Q8WX94 980 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 PSPC1Q8WXF1 523 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 APBB2Q92870 758 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 MORC2Q9Y6X9 1032 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 MICAL3Q7RTP6 2002 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 WDR5P61964 334 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 HYIQ5T013 277 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms