RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 A0A1W2PQ45 241 aaPredicted RBP18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 A0A1W2PQY0 241 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 ARHGEF35A5YM69 484 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 A6NJR5 290 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 DYNC1LI2O43237 492 aaPredicted RBP18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 LGALS2P05162 132 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 NPEPPSP55786 919 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 KMT5BQ4FZB7 885 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 ISM2Q6H9L7 571 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 UNC13DQ70J99 1090 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 OTUD6AQ7L8S5 288 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 PDLIM7Q9NR12 457 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
TSPAN4-205ENST00000397406 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 DUSP11O75319 330 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 PPFIA4O75335 1185 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 RHOBTB3O94955 611 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 SLC26A2P50443 739 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 EHHADHQ08426 723 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 GIT2Q14161 759 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 DPCR1Q3MIW9 517 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 XKR9Q5GH70 373 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 TRMT1LQ7Z2T5 733 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 GLG1Q92896 1179 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 SH2D3AQ9BRG2 576 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 REEP2Q9BRK0 252 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 NIFKQ9BYG3 293 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 UPF3AQ9H1J1 476 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 ANO10Q9NW15 660 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 RMND1Q9NWS8 449 aa18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 SEPT9Q9UHD8 586 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-205ENST00000397406 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 ACLYP53396 1101 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 TLE2Q04725 743 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 KCNA10Q16322 511 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 ANO6Q4KMQ2 910 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 PADI6Q6TGC4 694 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 RNF180Q86T96 592 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 TDHQ8IZJ6 230 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 FAM167AQ96KS9 214 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 CEP89Q96ST8 783 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 C16orf70Q9BSU1 422 aa18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 UBE2OQ9C0C9 1292 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-205ENST00000397406 KRT18P05783 430 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 CST5P28325 142 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 GJA9P57773 515 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 NKX3-2P78367 333 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 RAD51AP2Q09MP3 1159 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 PLCB4Q15147 1175 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 DGKDQ16760 1214 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 C11orf57Q6ZUT1 292 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 BBXQ8WY36 941 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 CEP170P1Q96L14 293 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 CCDC43Q96MW1 224 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 DNAJC25Q9H1X3 360 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 CYP26B1Q9NR63 512 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 NRBP2Q9NSY0 501 aa18.79■□□□□ 0.6
TSPAN4-205ENST00000397406 RSPH10B2B2RC85 870 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 RSPH10BP0C881 870 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 ZNF286BP0CG31 522 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 IDEP14735 1019 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 MARK3P27448 753 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 COASYQ13057 564 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 TARBP2Q15633 366 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 LRIT3Q3SXY7 679 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 CCDC65Q8IXS2 484 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 ATP8B4Q8TF62 1192 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 CCDC47Q96A33 483 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 TSEN34Q9BSV6 310 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 EXOC1Q9NV70 894 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 PANK4Q9NVE7 773 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 ERAP1Q9NZ08 941 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 LTBP2Q14767 1821 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 KAT6AQ92794 2004 aa18.78■□□□□ 0.6
TSPAN4-205ENST00000397406 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 CPT1AP50416 773 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 MAPK7Q13164 816 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 MTERF2Q49AM1 385 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 TIPINQ9BVW5 301 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 GDAQ9Y2T3 454 aa18.77■□□□□ 0.6
TSPAN4-205ENST00000397406 ZBTB42B2RXF5 422 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 ZNF131P52739 623 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 BEX3Q00994 111 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 GSE1Q14687 1217 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 FSCN1Q16658 493 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 SMYD4Q8IYR2 804 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 DAW1Q8N136 415 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 MLKLQ8NB16 471 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 BADQ92934 168 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 HPS3Q969F9 1004 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 RNPEPQ9H4A4 650 aa18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 LAMA2P24043 3122 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-205ENST00000397406 H3BRB1 525 aa18.75■□□□□ 0.59
TSPAN4-205ENST00000397406 HBP1O60381 514 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms