RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 CCDC51Q96ER9 411 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 DIABLOQ9NR28 239 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 TTC7AQ9ULT0 858 aaPredicted RBP13.17□□□□□ -0.3
SMU1-201ENST00000397149 UBE4BO95155 1302 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
SMU1-201ENST00000397149 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 CYTH3O43739 400 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 CASP14P31944 242 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 AP1B1Q10567 949 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 SLC16A2P36021 539 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 LPIN2Q92539 896 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 TRPC7Q9HCX4 862 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 KIF21BO75037 1637 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 CCDC149Q6ZUS6 474 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 PNMA1Q8ND90 353 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 RMDN1Q96DB5 314 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SP110Q9HB58 689 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 NFIBO00712 420 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SNAP25P60880 206 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 MEI1Q5TIA1 1274 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
SMU1-201ENST00000397149 GYG1P46976 350 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
SMU1-201ENST00000397149 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 TOMM70O94826 608 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 ATP12AP54707 1039 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 PDIK1LQ8N165 341 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 FAM32AQ9Y421 112 aaKnown RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.31e-7■■■■□ 23.9
SMU1-201ENST00000397149 E7EWF7 191 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 S100A5P33763 92 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 ERICH1Q86X53 443 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 RAB42Q8N4Z0 105 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 JRKLQ9Y4A0 524 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 PRAMEP78395 509 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 TRIM54Q9BYV2 358 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 TRIM37O94972 964 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 SOAT1P35610 550 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 INAQ16352 499 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 KIZQ2M2Z5 673 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 FRMD6Q96NE9 622 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 GOLGA8RI6L899 631 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 GDF11O95390 407 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 PTGDRQ13258 359 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 TRIP4Q15650 581 aaPredicted RBP13.15□□□□□ -0.3
SMU1-201ENST00000397149 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 V9GYQ6 96 aa13.15□□□□□ -0.3
SMU1-201ENST00000397149 COPB1P53618 953 aaKnown RBP13.15□□□□□ -0.31
SMU1-201ENST00000397149 LRRC36Q1X8D7 754 aa13.15□□□□□ -0.31
SMU1-201ENST00000397149 LRRC31Q6UY01 552 aa13.15□□□□□ -0.31
SMU1-201ENST00000397149 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.31
SMU1-201ENST00000397149 THNSL1Q8IYQ7 743 aa13.15□□□□□ -0.31
SMU1-201ENST00000397149 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.31
SMU1-201ENST00000397149 PGRMC1O00264 195 aaKnown RBP13.14□□□□□ -0.31
SMU1-201ENST00000397149 DFFAO00273 331 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 ZNF197O14709 1029 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
SMU1-201ENST00000397149 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
SMU1-201ENST00000397149 SYTL3Q4VX76 610 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 PARP10Q53GL7 1025 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 OLFML2BQ68BL8 750 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms