RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 CCT6AP40227 531 aaKnown RBP23.35■■□□□ 1.33
SEC13-207ENST00000397105 POLGP54098 1239 aaPredicted RBP23.35■■□□□ 1.33
SEC13-207ENST00000397105 CDC42EP1Q00587 391 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 LPIN1Q14693 890 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 FBXO47Q5MNV8 452 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 FAM173BQ6P4H8 233 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 ZNF579Q8NAF0 562 aaKnown RBP23.35■■□□□ 1.33
SEC13-207ENST00000397105 DBF4BQ8NFT6 615 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 GINS2Q9Y248 185 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 CLIC4Q9Y696 253 aa23.35■■□□□ 1.33
SEC13-207ENST00000397105 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.34■■□□□ 1.33
SEC13-207ENST00000397105 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.34■■□□□ 1.33
SEC13-207ENST00000397105 EFCAB14O75071 495 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 VTNP04004 478 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 TSHZ1Q6ZSZ6 1077 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 SNX29Q8TEQ0 813 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 PIGOQ8TEQ8 1089 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 APBB2Q92870 758 aa23.34■■□□□ 1.33
SEC13-207ENST00000397105 IFIH1Q9BYX4 1025 aaKnown RBP23.34■■□□□ 1.33
SEC13-207ENST00000397105 CRYBB1P53674 252 aaPredicted RBP23.33■■□□□ 1.33
SEC13-207ENST00000397105 MKRN4PQ13434 485 aaPredicted RBP23.33■■□□□ 1.33
SEC13-207ENST00000397105 KIZQ2M2Z5 673 aa23.33■■□□□ 1.33
SEC13-207ENST00000397105 POTEGQ6S5H5 508 aa23.33■■□□□ 1.33
SEC13-207ENST00000397105 OSBPL7Q9BZF2 842 aa23.33■■□□□ 1.33
SEC13-207ENST00000397105 DHX33Q9H6R0 707 aaKnown RBP23.33■■□□□ 1.33
SEC13-207ENST00000397105 SUCLA2Q9P2R7 463 aaPredicted RBP23.33■■□□□ 1.33
SEC13-207ENST00000397105 DBR1Q9UK59 544 aaKnown RBP23.33■■□□□ 1.33
SEC13-207ENST00000397105 A0A087WWV3 80 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 GAS2O43903 313 aaKnown RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 GPR32O75388 356 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 KCNJ6P48051 423 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 RARRES1P49788 294 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 NLRP11P59045 1033 aaKnown RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 CEBPZQ03701 1054 aaKnown RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 FOXD4L5Q5VV16 416 aaPredicted RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 FOXD4L4Q8WXT5 416 aaPredicted RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 AK8Q96MA6 479 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
SEC13-207ENST00000397105 KIAA1024Q9UPX6 916 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 TANC1Q9C0D5 1861 aa23.32■■□□□ 1.32
SEC13-207ENST00000397105 PP2D1A8MPX8 630 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 DGAT1O75907 488 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 FXR1P51114 621 aaKnown RBP eCLIP23.31■■□□□ 1.32
SEC13-207ENST00000397105 SMAD3P84022 425 aaKnown RBP23.31■■□□□ 1.32
SEC13-207ENST00000397105 DRP2Q13474 957 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 EMC2Q15006 297 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 PTPAQ15257 358 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 TCTN1Q2MV58 587 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 PHOSPHO2Q8TCD6 241 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 TCP11Q8WWU5 503 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 PPP1R16BQ96T49 567 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 ADAMTS10Q9H324 1103 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 AGO3Q9H9G7 860 aaKnown RBP23.31■■□□□ 1.32
SEC13-207ENST00000397105 CDHR5Q9HBB8 845 aa23.31■■□□□ 1.32
SEC13-207ENST00000397105 SCN5AQ14524 2016 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 SOX1O00570 391 aaPredicted RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 F13A1P00488 732 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 ATP2A2P16615 1042 aaKnown RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 CDC25AP30304 524 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 LONP1P36776 959 aaKnown RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 WDR5P61964 334 aaKnown RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 PAK2Q13177 524 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 PKP1Q13835 747 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 ODR4Q5SWX8 454 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 FAM43BQ6ZT52 329 aaPredicted RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 NLRP7Q8WX94 980 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 SCLT1Q96NL6 688 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 USP28Q96RU2 1077 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 SLC9A7Q96T83 725 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 OSMRQ99650 979 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 MTRQ99707 1265 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 DDX19AQ9NUU7 478 aaKnown RBP23.3■■□□□ 1.32
SEC13-207ENST00000397105 DNM3Q9UQ16 869 aa23.3■■□□□ 1.32
SEC13-207ENST00000397105 RPS6KA5O75582 802 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 CD52P31358 61 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 GPC3P51654 580 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 ECM1Q16610 540 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 RHPN2Q8IUC4 686 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 PSPC1Q8WXF1 523 aaKnown RBP23.29■■□□□ 1.32
SEC13-207ENST00000397105 TMEM143Q96AN5 459 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 MMTAG2Q9BU76 263 aaKnown RBP23.29■■□□□ 1.32
SEC13-207ENST00000397105 ATP6V0A4Q9HBG4 840 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 BMP2KQ9NSY1 1161 aaPredicted RBP23.29■■□□□ 1.32
SEC13-207ENST00000397105 PADI3Q9ULW8 664 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
SEC13-207ENST00000397105 ARHGEF35A5YM69 484 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 GPR182O15218 404 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 SLC26A4O43511 780 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 EIF4BP23588 611 aaKnown RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 UBA7P41226 1012 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 ZRSR1Q15695 479 aaKnown RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 FAM109BQ6ICB4 259 aaPredicted RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 TMEM40Q8WWA1 233 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 PRPF31Q8WWY3 499 aaKnown RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 FTHL17Q9BXU8 183 aa23.28■■□□□ 1.32
SEC13-207ENST00000397105 NOC2LQ9Y3T9 749 aaKnown RBP23.28■■□□□ 1.32
SEC13-207ENST00000397105 MORC2Q9Y6X9 1032 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms