RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ITGB3BPQ13352 177 aaPredicted RBP17.07■□□□□ 0.32
SEC13-206ENST00000397102 DSC3Q14574 896 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 LRRC55Q6ZSA7 311 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 CYP2W1Q8TAV3 490 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 CASD1Q96PB1 797 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 MTA3Q9BTC8 594 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 IGHDP01880 384 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 ARP10275 920 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 CLCN5P51795 746 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
SEC13-206ENST00000397102 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 CMTR1Q8N1G2 835 aaKnown RBP17.06■□□□□ 0.32
SEC13-206ENST00000397102 OSMRQ99650 979 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 SMOC2Q9H3U7 446 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
SEC13-206ENST00000397102 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
SEC13-206ENST00000397102 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 BACH1O14867 736 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 CALM1P0DP23 149 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 CALM2P0DP24 149 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 CALM3P0DP25 149 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 PBX3P40426 434 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 ID4P47928 161 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 ABHD15Q6UXT9 468 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 ABI1Q8IZP0 508 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 MRPL43Q8N983 215 aaKnown RBP17.05■□□□□ 0.32
SEC13-206ENST00000397102 TDRD5Q8NAT2 981 aaKnown RBP17.05■□□□□ 0.32
SEC13-206ENST00000397102 PPP1R16BQ96T49 567 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
SEC13-206ENST00000397102 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
SEC13-206ENST00000397102 hCG_1642624A0A1W2PR95 340 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 ZBTB42B2RXF5 422 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
SEC13-206ENST00000397102 GPR32O75388 356 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 C22orf31O95567 290 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 CCNE2O96020 404 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 ASGR2P07307 311 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 CCDC60Q8IWA6 550 aaPredicted RBP17.04■□□□□ 0.32
SEC13-206ENST00000397102 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 SLC39A11Q8N1S5 342 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
SEC13-206ENST00000397102 MEIS1O00470 390 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 PRC1O43663 620 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
SEC13-206ENST00000397102 RXRAP19793 462 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 KIAA1841Q6NSI8 718 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 DZANK1Q9NVP4 752 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 LIMD1Q9UGP4 676 aa17.03■□□□□ 0.32
SEC13-206ENST00000397102 DMDP11532 3685 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 FOSP01100 380 aaPredicted RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 VTNP04004 478 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 ZSCAN20P17040 1043 aaPredicted RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 CHMLP26374 656 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 BMS1Q14692 1282 aaKnown RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 RARS2Q5T160 578 aaKnown RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 TTC22Q5TAA0 569 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 CWF19L1Q69YN2 538 aaKnown RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 MIS18BP1Q6P0N0 1132 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 TMTC3Q6ZXV5 915 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 TMEM87BQ96K49 555 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 ANO3Q9BYT9 981 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.32
SEC13-206ENST00000397102 DBR1Q9UK59 544 aaKnown RBP17.02■□□□□ 0.32
SEC13-206ENST00000397102 ATP4AP20648 1035 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 MCM5P33992 734 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 LIFRP42702 1097 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 ATAT1Q5SQI0 421 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 NIPA1Q7RTP0 329 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 METTL13Q8N6R0 699 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 MAP4K1Q92918 833 aa17.01■□□□□ 0.31
SEC13-206ENST00000397102 GVINP1Q7Z2Y8 2422 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms