RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 MORC4Q8TE76 937 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 EXOC4Q96A65 974 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 ATP8A1Q9Y2Q0 1164 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 PTPRKQ15262 1439 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 TRPA1O75762 1119 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 RNF26Q9BY78 433 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-208ENST00000397030 DRC3Q9H069 523 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 A8MXQ7 604 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 DYNC1LI2O43237 492 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-208ENST00000397030 HSPA6P17066 643 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 GTF2H3Q13889 308 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 ANKRD40Q6AI12 368 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 FOXP1Q9H334 677 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-208ENST00000397030 GTSE1Q9NYZ3 720 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 TJP2Q9UDY2 1190 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 UGGT1Q9NYU2 1555 aa18.68■□□□□ 0.58
MCF2L-208ENST00000397030 MYOM2P54296 1465 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 FBXL5Q9UKA1 691 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ZMYND10O75800 440 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 BRD1O95696 1058 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L24Q0WX57 530 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 TMEM270Q6UE05 265 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 MAML1Q92585 1016 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 CCDC124Q96CT7 223 aaKnown RBP18.67■□□□□ 0.58
MCF2L-208ENST00000397030 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 SYTL3Q4VX76 610 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ABHD8Q96I13 439 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 hCG_1984214I3L0E3 225 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ZNF713Q8N859 430 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-208ENST00000397030 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ZCWPW1Q9H0M4 648 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 HPS4Q9NQG7 708 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 UBE4BO95155 1302 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ERVV-1B6SEH8 477 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 HUNKP57058 714 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 ACAD9Q9H845 621 aa18.67■□□□□ 0.58
MCF2L-208ENST00000397030 EPN1Q9Y6I3 576 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-208ENST00000397030 INSRP06213 1382 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 RAB42Q8N4Z0 105 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 TRAIPQ9BWF2 469 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ZNF212Q9UDV6 495 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 CNOT7Q9UIV1 285 aaKnown RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 GOLGA8KD6RF30 607 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ARHGAP25P42331 645 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 TAF1BQ53T94 588 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 INTUQ9ULD6 942 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ZNF658Q5TYW1 1059 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 AP1M1Q9BXS5 423 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 GSPT1P15170 499 aaKnown RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 RAD51Q06609 339 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 PDCD2Q16342 344 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 ZSWIM6Q9HCJ5 1215 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 PCDHB7Q9Y5E2 793 aa18.66■□□□□ 0.58
MCF2L-208ENST00000397030 NMT2O60551 498 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 DCUN1D1Q96GG9 259 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 PCSK1NQ9UHG2 260 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 ARHGEF25Q86VW2 580 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 TMEM260Q9NX78 707 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 DAAM1Q9Y4D1 1078 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 HEG1Q9ULI3 1381 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 CA4P22748 312 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 MFSD4BQ5TF39 518 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 ATG16L1Q676U5 607 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 BZW1Q7L1Q6 419 aaKnown RBP18.65■□□□□ 0.58
MCF2L-208ENST00000397030 COL15A1P39059 1388 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 STAT3P40763 770 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 PADI6Q6TGC4 694 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 SLC26A7Q8TE54 656 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 HEMGNQ9BXL5 484 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 HSPA4LO95757 839 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 WASHC5Q12768 1159 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 MAN2A1Q16706 1144 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 VPS39Q96JC1 886 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 GJD4Q96KN9 370 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-208ENST00000397030 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 PRDX5P30044 214 aa18.65■□□□□ 0.58
MCF2L-208ENST00000397030 ZC3H12BQ5HYM0 836 aaKnown RBP18.65■□□□□ 0.58
MCF2L-208ENST00000397030 DHTKD1Q96HY7 919 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-208ENST00000397030 ASB14A6NK59 587 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms