RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GLT1D1Q96MS3 346 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 E9PMD0 336 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 NOP56O00567 594 aaKnown RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUP98-205ENST00000397007 EDN1P05305 212 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 NDUFA8P51970 172 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 GIT2Q14161 759 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 KARSQ15046 597 aaKnown RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 NME8Q8N427 588 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TRIP11Q15643 1979 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 C17orf102A2RUQ5 167 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 CHMP2AO43633 222 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 IQCF3P0C7M6 154 aa11.83□□□□□ -0.51
NUP98-205ENST00000397007 C16orf59Q7L2K0 433 aa11.83□□□□□ -0.51
NUP98-205ENST00000397007 CAGE1Q8TC20 777 aa11.83□□□□□ -0.51
NUP98-205ENST00000397007 RAB34Q9BZG1 259 aa11.83□□□□□ -0.51
NUP98-205ENST00000397007 TTC3P53804 2025 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
NUP98-205ENST00000397007 CKBP12277 381 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 NPEPPSP55786 919 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 DSC3Q14574 896 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
NUP98-205ENST00000397007 MAGEB2O15479 319 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 DGAT1O75907 488 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
NUP98-205ENST00000397007 SOX10P56693 466 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
NUP98-205ENST00000397007 TAF2Q6P1X5 1199 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 ERMNQ8TAM6 284 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 ARHGAP28Q9P2N2 729 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
NUP98-205ENST00000397007 FAM189A1O60320 539 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 GPC3P51654 580 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 CYP4A11Q02928 519 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 DPYDQ12882 1025 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 STK38Q15208 465 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 LONRF3Q496Y0 759 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 TMEM40Q8WWA1 233 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 GDPD2Q9HCC8 539 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 ZMYM2Q9UBW7 1377 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 UMODL1Q5DID0 1318 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 MYMKA6NI61 221 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 TIMP1P01033 207 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 ATP2B1P20020 1258 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 PROZP22891 400 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 HOXD13P35453 343 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 CCT6AP40227 531 aaKnown RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 PTGISQ16647 500 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 RC3H2Q9HBD1 1191 aaKnown RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 ODF2LQ9ULJ1 636 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 NBNO60934 754 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 CLTBP09497 229 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 GLRA2P23416 452 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 KLRC1P26715 233 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 TLE2Q04725 743 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 EMC2Q15006 297 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 KRT79Q5XKE5 535 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 SPIRE2Q8WWL2 714 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
NUP98-205ENST00000397007 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 C17orf75Q9HAS0 396 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 CITO14578 2027 aa11.82□□□□□ -0.52
NUP98-205ENST00000397007 INPPL1O15357 1258 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 PIGRP01833 764 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 MYL1P05976 194 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
NUP98-205ENST00000397007 TRIM9Q9C026 710 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 PTPRHQ9HD43 1115 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms