RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 SBF1O95248 1867 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 PVALEFA0A1B0GWK0 134 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 H2AFZP0C0S5 128 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 FGFR4P22455 802 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 NR2F2P24468 414 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 CRYMQ14894 314 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 AGBL2Q5U5Z8 902 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 H2AFVQ71UI9 128 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 FMNL3Q8IVF7 1028 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 SH3RF3Q8TEJ3 882 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 ARPP21Q9UBL0 812 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 AGAP1Q9UPQ3 857 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 CLIC2O15247 247 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 UBOX5O94941 541 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 EMC10Q5UCC4 262 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 GDAP1Q8TB36 358 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 EPS8L3Q8TE67 593 aaKnown RBP10.68□□□□□ -0.7
TRIM39-203ENST00000396547 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
TRIM39-203ENST00000396547 NUCKS1Q9H1E3 243 aaKnown RBP10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ATP8A2Q9NTI2 1148 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 GGA2Q9UJY4 613 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ZNF652Q9Y2D9 606 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 MEIS1O00470 390 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 CETN3O15182 167 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 MGRN1O60291 552 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 IFI16Q16666 785 aaKnown RBP10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ERMARDQ5T6L9 678 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 FAM129AQ9BZQ8 928 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 KDM4CQ9H3R0 1056 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 AMFRQ9UKV5 643 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 MINPP1Q9UNW1 487 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
TRIM39-203ENST00000396547 DAAM1Q9Y4D1 1078 aa10.68□□□□□ -0.7
TRIM39-203ENST00000396547 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 HIBADHP31937 336 aaKnown RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 DR1Q01658 176 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 SATB1Q01826 763 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 BIRC2Q13490 618 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 EXOC3L4Q17RC7 722 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 TRPM8Q7Z2W7 1104 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 TXNRD3Q86VQ6 643 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 CLEC10AQ8IUN9 316 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 FBXO25Q8TCJ0 367 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 RAB34Q9BZG1 259 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 SEMA4AQ9H3S1 761 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 ECT2Q9H8V3 914 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 IGF2BP3O00425 579 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 FGRP09769 529 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 MYBP10242 640 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 UCHL3P15374 230 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 STAT3P40763 770 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 PMS2P54278 862 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 NFIXQ14938 502 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 HOOK3Q86VS8 718 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 ACTRT1Q8TDG2 376 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 KLHL29Q96CT2 875 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 IKZF4Q9H2S9 585 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 BCAS3Q9H6U6 928 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 FLOT1O75955 427 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 MMP10P09238 476 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 PCP11498 1178 aaKnown RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 GALCP54803 685 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 IRF2BP2Q7Z5L9 587 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 GLYCTKQ8IVS8 523 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 SLC17A8Q8NDX2 589 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 GPR101Q96P66 508 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 PAIP2Q9BPZ3 127 aaKnown RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 ERVK-5Q9HDB9 667 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 FAM114A2Q9NRY5 505 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 FGFR1OP2Q9NVK5 253 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 ARMCX3Q9UH62 379 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-203ENST00000396547 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 PPP1R9AQ9ULJ8 1098 aa10.67□□□□□ -0.7
TRIM39-203ENST00000396547 MYH3P11055 1940 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms