RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 NBNO60934 754 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 STBD1O95210 358 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 C22orf31O95567 290 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 PDILTQ8N807 584 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 OSMRQ99650 979 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 CHRNA1P02708 482 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 TPM2P07951 284 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 SELPP16109 830 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 FGFR4P22455 802 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 HOXC8P31273 242 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 KARSQ15046 597 aaKnown RBP11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 PTPAQ15257 358 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 KIAA0319LQ8IZA0 1049 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 NLRP4Q96MN2 994 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 BHMT2Q9H2M3 363 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 CDY2AQ9Y6F7 541 aa11.28□□□□□ -0.6
THUMPD1-202ENST00000396083 MBLAC1A4D2B0 266 aaPredicted RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 NLRP11P59045 1033 aaKnown RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 GPNMBQ14956 572 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 TRIM71Q2Q1W2 868 aaKnown RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 FAM109BQ6ICB4 259 aaPredicted RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 RDM1Q8NG50 284 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 ERMNQ8TAM6 284 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 FAM167AQ96KS9 214 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 RAB34Q9BZG1 259 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 LTBP2Q14767 1821 aa11.27□□□□□ -0.6
THUMPD1-202ENST00000396083 BRD1O95696 1058 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 UBA7P41226 1012 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 HAUS3Q68CZ6 603 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 C4orf19Q8IY42 314 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 DBF4BQ8NFT6 615 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 CAGE1Q8TC20 777 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 SLC7A3Q8WY07 619 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 CDK5RAP3Q96JB5 506 aa11.27□□□□□ -0.61
THUMPD1-202ENST00000396083 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 RPA1P27694 616 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 ME1P48163 572 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 RARRES1P49788 294 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 MKRN4PQ13434 485 aaPredicted RBP11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 VWCEQ96DN2 955 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 TRANK1O15050 2925 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 LAD1O00515 517 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 PCDHA2Q9Y5H9 948 aa11.26□□□□□ -0.61
THUMPD1-202ENST00000396083 M0QZ92 97 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SPTLC2O15270 562 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 UPP2O95045 317 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 LIG1P18858 919 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 TMOD1P28289 359 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 CD52P31358 61 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 PRPHP41219 470 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 ORC2Q13416 577 aaPredicted RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 TARBP2Q15633 366 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 CABP7Q86V35 215 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SYMPKQ92797 1274 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 ZNF396Q96N95 335 aaPredicted RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 PDIA5Q14554 519 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 EMC2Q15006 297 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 TMEM240Q5SV17 173 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 IER5Q5VY09 327 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 TDHQ8IZJ6 230 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 LRRC15Q8TF66 581 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 STAMQ92783 540 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms