RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 PCYT2Q99447 389 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 VPS16Q9H269 839 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TELO2Q9Y4R8 837 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MYH11P35749 1972 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 DOCK5Q9H7D0 1870 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 KIF3CO14782 793 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ARIH2O95376 493 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 GCNT3O95395 438 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 NMT1P30419 496 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TM4SF4P48230 202 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 NPEPPSP55786 919 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 GTF2BQ00403 316 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 PRKCEQ02156 737 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 LRMPQ12912 555 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ADAM9Q13443 819 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TARBP2Q15633 366 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 C17orf99Q6UX52 265 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 PLPPR4Q7Z2D5 763 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC9A9Q8IVB4 645 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 HVCN1Q96D96 273 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CEP89Q96ST8 783 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 GPR20Q99678 358 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MLXIPQ9HAP2 919 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC5A4Q9NY91 659 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 PLXNB2O15031 1838 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 OATP04181 439 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 HOXC6P09630 235 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 FECHP22830 423 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 ABCD1P33897 745 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 MTIF2P46199 727 aaKnown RBP13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC26A2P50443 739 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 STAT5BP51692 787 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 UBXN1Q04323 297 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 PPP2R3AQ06190 1150 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 MORN1Q5T089 497 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 UTP14CQ5TAP6 766 aaKnown RBP13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 FAM167AQ96KS9 214 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 PANX2Q96RD6 677 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 TMEM206Q9H813 350 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 PYCARDQ9ULZ3 195 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 MCM3APO60318 1980 aa13.1□□□□□ -0.31
GTF2A2-202ENST00000396060 EMSYQ7Z589 1322 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 NRDCO43847 1150 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 TLR2O60603 784 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 SKILP12757 684 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 RFC5P40937 340 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 TBC1D8BQ0IIM8 1120 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 PLA2G4FQ68DD2 849 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 USP6NLQ92738 828 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 NDST4Q9H3R1 872 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 METTL14Q9HCE5 456 aaKnown RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
GTF2A2-202ENST00000396060 ZMYM2Q9UBW7 1377 aa13.08□□□□□ -0.31
GTF2A2-202ENST00000396060 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms