RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 HIP1RO75146 1068 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 NPEPPSP55786 919 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 MYL5Q02045 173 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 TBC1D8BQ0IIM8 1120 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 STK4Q13043 487 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 PAK1Q13153 545 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 PLCB4Q15147 1175 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 LUZP1Q86V48 1076 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 ADSSL1Q8N142 457 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 GUF1Q8N442 669 aaKnown RBP15.14■□□□□ 0.01
VAPB-202ENST00000395802 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
VAPB-202ENST00000395802 SLC39A2Q9NP94 309 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 RWDD2AQ9UIY3 292 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 TRIM17Q9Y577 477 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 WDR81Q562E7 1941 aa15.14■□□□□ 0.01
VAPB-202ENST00000395802 COL1A2P08123 1366 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PPP1R3GB7ZBB8 358 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 H0YCG3 227 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PLS3P13797 630 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 ELNP15502 786 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 MARK3P27448 753 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 GJA9P57773 515 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 CCDC173Q0VFZ6 552 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 DMP1Q13316 513 aaPredicted RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 IQCB1Q15051 598 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 FSCN1Q16658 493 aaKnown RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 FAM102BQ5T8I3 360 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 TCP11Q8WWU5 503 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 IFT74Q96LB3 600 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 C16orf70Q9BSU1 422 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 GDAQ9Y2T3 454 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 MAGEB2O15479 319 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 ADCY6O43306 1168 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 GRK4P32298 578 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PRCPP42785 496 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 DNM2P50570 870 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 NKX3-2P78367 333 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 EMC2Q15006 297 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 PPP2R5AQ15172 486 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 TARBP2Q15633 366 aaKnown RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 TPD52L1Q16890 204 aaPredicted RBP15.13■□□□□ 0.01
VAPB-202ENST00000395802 MAP3K21Q5TCX8 1036 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 FOXR2Q6PJQ5 311 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
VAPB-202ENST00000395802 ZSWIM8A7E2V4 1837 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 UBE4BO95155 1302 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 TMEM150BA6NC51 233 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 EIF3DO15371 548 aaKnown RBP eCLIP15.12■□□□□ 0.01
VAPB-202ENST00000395802 MAFO75444 373 aaPredicted RBP15.12■□□□□ 0.01
VAPB-202ENST00000395802 C6orf222P0C671 652 aaPredicted RBP15.12■□□□□ 0.01
VAPB-202ENST00000395802 CAP1Q01518 475 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
VAPB-202ENST00000395802 KIAA0895Q8NCT3 520 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 TRPV1Q8NER1 839 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 TSG101Q99816 390 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
VAPB-202ENST00000395802 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 RRN3P2A6NIE6 340 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
VAPB-202ENST00000395802 F2P00734 622 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 TMOD1P28289 359 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 LRRC63Q05C16 580 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 MAEAQ7L5Y9 396 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 DHX40Q8IX18 779 aaKnown RBP15.11■□□□□ 0.01
VAPB-202ENST00000395802 AOPEPQ8N6M6 819 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 DNAJC5GQ8N7S2 189 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 NELFBQ8WX92 580 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 UPF3AQ9H1J1 476 aaKnown RBP15.11■□□□□ 0.01
VAPB-202ENST00000395802 HMX1Q9NP08 348 aaPredicted RBP15.11■□□□□ 0.01
VAPB-202ENST00000395802 XPNPEP3Q9NQH7 507 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 PCDHA2Q9Y5H9 948 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 PHLPP2Q6ZVD8 1323 aa15.11■□□□□ 0.01
VAPB-202ENST00000395802 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 GCNT3O95395 438 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 RSPH10BP0C881 870 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 CCNE1P24864 410 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 MXD4Q14582 209 aaPredicted RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 SPATA1Q5VX52 437 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 IER5Q5VY09 327 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 ZNF720Q7Z2F6 126 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 PCSK9Q8NBP7 692 aaKnown RBP15.1■□□□□ 0.01
VAPB-202ENST00000395802 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 P2RX5Q93086 422 aa15.1■□□□□ 0.01
VAPB-202ENST00000395802 RNPEPQ9H4A4 650 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms