RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ALG13Q9NP73 1137 aaKnown RBP20.37■□□□□ 0.85
CXCL12-204ENST00000395793 GJB4Q9NTQ9 266 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 TPCN1Q9ULQ1 816 aa20.37■□□□□ 0.85
CXCL12-204ENST00000395793 C9IYK1 514 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 H3BQ06 376 aaPredicted RBP20.36■□□□□ 0.85
CXCL12-204ENST00000395793 MMP1P03956 469 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 STAG3L1P0CL83 205 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 DNAJB1P25685 340 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 ETNPPLQ8TBG4 499 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 PABPC5Q96DU9 382 aaKnown RBP20.36■□□□□ 0.85
CXCL12-204ENST00000395793 FAM167AQ96KS9 214 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 ADAMTS10Q9H324 1103 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 RGS18Q9NS28 235 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 HCSTQ9UBK5 93 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 CEP131Q9UPN4 1083 aa20.36■□□□□ 0.85
CXCL12-204ENST00000395793 TMEM150BA6NC51 233 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 STBD1O95210 358 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 CTDNEP1O95476 244 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 ITGB1P05556 798 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 JAK3P52333 1124 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 DSC3Q14574 896 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 INF2Q27J81 1249 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 EFCAB12Q6NXP0 572 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 ZNF668Q96K58 619 aaPredicted RBP20.35■□□□□ 0.85
CXCL12-204ENST00000395793 PLVAPQ9BX97 442 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 C22orf23Q9BZE7 217 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 PLAGL2Q9UPG8 496 aa20.35■□□□□ 0.85
CXCL12-204ENST00000395793 STK36Q9NRP7 1315 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 MAGEB2O15479 319 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 SLC37A4O43826 429 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 PFKFB2O60825 505 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 SFNP31947 248 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 GTF2F1P35269 517 aaKnown RBP eCLIP20.34■□□□□ 0.85
CXCL12-204ENST00000395793 LTBRP36941 435 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
CXCL12-204ENST00000395793 HYAL1Q12794 435 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 TARBP2Q15633 366 aaKnown RBP20.34■□□□□ 0.85
CXCL12-204ENST00000395793 FAM102BQ5T8I3 360 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 PTCRAQ6ISU1 281 aaPredicted RBP20.34■□□□□ 0.85
CXCL12-204ENST00000395793 CPLX2Q6PUV4 134 aaKnown RBP20.34■□□□□ 0.85
CXCL12-204ENST00000395793 MOXD1Q6UVY6 613 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 MIER3Q7Z3K6 550 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 P2RX5Q93086 422 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 CEP89Q96ST8 783 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 PHF20Q9BVI0 1012 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 EPHX3Q9H6B9 360 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 LRFN2Q9ULH4 789 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 AKT3Q9Y243 479 aa20.34■□□□□ 0.85
CXCL12-204ENST00000395793 DENND3A2RUS2 1198 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 GRXCR2A6NFK2 248 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 GPR182O15218 404 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 IRS1P35568 1242 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 DRP2Q13474 957 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 NONOQ15233 471 aaKnown RBP eCLIP20.33■□□□□ 0.85
CXCL12-204ENST00000395793 GALNT17Q6IS24 598 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 SLC24A5Q71RS6 500 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 FAM178BQ8IXR5 827 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.85
CXCL12-204ENST00000395793 KLHL23Q8NBE8 558 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 SPPL3Q8TCT6 385 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 OXER1Q8TDS5 423 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
CXCL12-204ENST00000395793 C1orf112Q9NSG2 853 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 NRBP2Q9NSY0 501 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 CLDND1Q9NY35 253 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 RAPGEFL1Q9UHV5 662 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 PCDHB7Q9Y5E2 793 aa20.33■□□□□ 0.85
CXCL12-204ENST00000395793 LARGE1O95461 756 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 GPC3P51654 580 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 AK2P54819 239 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 FAM189BP81408 668 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 DLX2Q07687 328 aaPredicted RBP20.32■□□□□ 0.84
CXCL12-204ENST00000395793 CTC1Q2NKJ3 1217 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 KRT25Q7Z3Z0 450 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 ADGRD2Q7Z7M1 963 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 RDM1Q8NG50 284 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 SH2D3AQ9BRG2 576 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 RNF19AQ9NV58 838 aa20.32■□□□□ 0.84
CXCL12-204ENST00000395793 DDX25Q9UHL0 483 aaKnown RBP20.32■□□□□ 0.84
CXCL12-204ENST00000395793 EML1O00423 815 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 LINC01565O15544 149 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 FGFR1P11362 822 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 COL9A1P20849 921 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 LETM2Q2VYF4 491 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 EARS2Q5JPH6 523 aaKnown RBP20.31■□□□□ 0.84
CXCL12-204ENST00000395793 ODR4Q5SWX8 454 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 EP400NLQ6ZTU2 488 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 SEPT9Q9UHD8 586 aaPredicted RBP20.31■□□□□ 0.84
CXCL12-204ENST00000395793 VAV3Q9UKW4 847 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 PCDHGC5Q9Y5F6 944 aa20.31■□□□□ 0.84
CXCL12-204ENST00000395793 ARID2Q68CP9 1835 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 FAM205CA6NFA0 338 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 TBKBP1A7MCY6 615 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 TBX10O75333 385 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 CDKL5O76039 1030 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 FGFR4P22455 802 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 ANAPC15P60006 121 aa20.3■□□□□ 0.84
CXCL12-204ENST00000395793 TBC1D8BQ0IIM8 1120 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms