RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 TNFRSF8P28908 595 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 STAT1P42224 750 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 CARSP49589 748 aaKnown RBP10.09□□□□□ -0.79
CDRT1-203ENST00000395667 COG2Q14746 738 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 SYCP3Q8IZU3 236 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 TSEN2Q8NCE0 465 aaKnown RBP10.09□□□□□ -0.79
CDRT1-203ENST00000395667 WDR11Q9BZH6 1224 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 SIX2Q9NPC8 291 aa10.09□□□□□ -0.79
CDRT1-203ENST00000395667 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.09□□□□□ -0.79
CDRT1-203ENST00000395667 GTPBP10A4D1E9 387 aaKnown RBP10.08□□□□□ -0.8
CDRT1-203ENST00000395667 DDX39AO00148 427 aaKnown RBP10.08□□□□□ -0.8
CDRT1-203ENST00000395667 RAD17O75943 681 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 FERP16591 822 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 PLS1Q14651 629 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ALS2CLQ60I27 953 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-203ENST00000395667 USP38Q8NB14 1042 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 CAVIN3Q969G5 261 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 PKD2L1Q9P0L9 805 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 SEL1LQ9UBV2 794 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 FBXL5Q9UKA1 691 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ZMYM2Q9UBW7 1377 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 FRMPD4Q14CM0 1322 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 GOLGA8KD6RF30 607 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ARP10275 920 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ANXA13P27216 316 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 GUCY2FP51841 1108 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 JAM2P57087 298 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 PPFIA1Q13136 1202 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 SLC15A2Q16348 729 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 MIGA2Q7L4E1 593 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 PEX26Q7Z412 305 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 LMBR1Q8WVP7 490 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 FAM151AQ8WW52 585 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
CDRT1-203ENST00000395667 UNC45AQ9H3U1 944 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 GDF3Q9NR23 364 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 FBXO28Q9NVF7 368 aa10.08□□□□□ -0.8
CDRT1-203ENST00000395667 ZNF70Q9UC06 446 aaPredicted RBP10.08□□□□□ -0.8
CDRT1-203ENST00000395667 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 EVI5O60447 810 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 VIL1P09327 827 aaKnown RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FMO5P49326 533 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 SKIDA1Q1XH10 827 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 LRRC31Q6UY01 552 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 ZNF720Q7Z2F6 126 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 LDHDQ86WU2 507 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 TPCN2Q8NHX9 752 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 C7orf43Q8WVR3 580 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 PBKQ96KB5 322 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 LXNQ9BS40 222 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 VCPKMTQ9H867 229 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 DDX3XO00571 662 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 RAD51CO43502 376 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 EXOC3O60645 756 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 RPS6KA5O75582 802 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 TRIM49P0CI25 452 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 TRIM49CP0CI26 452 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 SETQ01105 290 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 NNTQ13423 1086 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 CFAP58Q5T655 872 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FOXR1Q6PIV2 292 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 DAAM2Q86T65 1068 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 RDH13Q8NBN7 331 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 BORCS6Q96GS4 357 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 AGPAT3Q9NRZ7 376 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 SEPT11Q9NVA2 429 aaKnown RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 WRAP73Q9P2S5 460 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 RSPH14Q9UHP6 348 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 DNAJC12Q9UKB3 198 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 COL2A1P02458 1487 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FAM153BP0C7A2 387 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 SOX5P35711 763 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 DRAP1Q14919 205 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 DNAJC21Q5F1R6 531 aaKnown RBP10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FAM160B2Q86V87 743 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 LRRC57Q8N9N7 239 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 CASKIN2Q8WXE0 1202 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 FAM153AQ9UHL3 310 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 ODF2LQ9ULJ1 636 aa10.07□□□□□ -0.8
CDRT1-203ENST00000395667 UBE4BO95155 1302 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 FAM170AA1A519 330 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 F8VZ95 297 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 CES2O00748 559 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 SYCE1Q8N0S2 351 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
CDRT1-203ENST00000395667 ZIM3Q96PE6 472 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms