RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 LENG1Q96BZ8 264 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-202ENST00000395354 BHMT2Q9H2M3 363 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 SEMA6BQ9H3T3 888 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 SLC9A2Q9UBY0 812 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 Q9Y3F1 56 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 ITIH6Q6UXX5 1313 aa21.33■■□□□ 1
LMNB1-202ENST00000395354 DOCK5Q9H7D0 1870 aa21.33■■□□□ 1
LMNB1-202ENST00000395354 DUSP11O75319 330 aaKnown RBP21.32■■□□□ 1
LMNB1-202ENST00000395354 MYCP01106 439 aaPredicted RBP21.32■■□□□ 1
LMNB1-202ENST00000395354 P4HBP07237 508 aaKnown RBP21.32■■□□□ 1
LMNB1-202ENST00000395354 RARBP10826 455 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 SKILP12757 684 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 SP4Q02446 784 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 HERC4Q5GLZ8 1057 aaPredicted RBP21.32■■□□□ 1
LMNB1-202ENST00000395354 RDM1Q8NG50 284 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 SPATA33Q96N06 139 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 TSG101Q99816 390 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 UNC93B1Q9H1C4 597 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
LMNB1-202ENST00000395354 TCEAL9Q9UHQ7 104 aa21.32■■□□□ 1
LMNB1-202ENST00000395354 N4BP3O15049 544 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 LYPLA2O95372 231 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 KCNJ6P48051 423 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 KRT76Q01546 638 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 MTFR1Q15390 333 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 OR6J1Q8NGC5 347 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 EMID1Q96A84 441 aaPredicted RBP21.31■■□□□ 1
LMNB1-202ENST00000395354 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.31■■□□□ 1
LMNB1-202ENST00000395354 AP5M1Q9H0R1 490 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 HTTP42858 3142 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 MSCO60682 206 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 CCNE2O96020 404 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 GAP43P17677 238 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 SFNP31947 248 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 JAK3P52333 1124 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 HSDL1Q3SXM5 330 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 ZNF746Q6NUN9 644 aaPredicted RBP21.31■■□□□ 1
LMNB1-202ENST00000395354 RINT1Q6NUQ1 792 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 TLK2Q86UE8 772 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 ARMC5Q96C12 935 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 REEP2Q9BRK0 252 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 MCOLN1Q9GZU1 580 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 ZSWIM4Q9H7M6 989 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 KCND1Q9NSA2 647 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 TELO2Q9Y4R8 837 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 COL4A3BPQ9Y5P4 624 aa21.31■■□□□ 1
LMNB1-202ENST00000395354 NPHP3-ACAD11A0A0J9YXS1 232 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 TEX33O43247 280 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 TPM2P07951 284 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 CCL5P13501 91 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 ACTR2P61160 394 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 C1orf186Q6ZWK4 172 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 ZNF333Q96JL9 665 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 LXNQ9BS40 222 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 RNF208Q9H0X6 261 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 SAMM50Q9Y512 469 aa21.3■■□□□ 1
LMNB1-202ENST00000395354 LOXHD1Q8IVV2 1947 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 NOP56O00567 594 aaKnown RBP21.29■■□□□ 1
LMNB1-202ENST00000395354 TBCAO75347 108 aaKnown RBP21.29■■□□□ 1
LMNB1-202ENST00000395354 OFD1O75665 1012 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 ZCWPW2Q504Y3 356 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 PPTC7Q8NI37 304 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 AFG1LQ8WV93 481 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 RUSC1Q9BVN2 902 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 TMX1Q9H3N1 280 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 XPNPEP3Q9NQH7 507 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 TAB2Q9NYJ8 693 aa21.29■■□□□ 1
LMNB1-202ENST00000395354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.29■■□□□ 16e-7■■■□□ 17.8
LMNB1-202ENST00000395354 LGALS16A8MUM7 142 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 WDR64B1ANS9 1081 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 GJA9P57773 515 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 TRIM14Q14142 442 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 LHX8Q68G74 356 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.28■■□□□ 1
LMNB1-202ENST00000395354 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 SMAP1Q8IYB5 467 aaPredicted RBP21.28■■□□□ 1
LMNB1-202ENST00000395354 PIGOQ8TEQ8 1089 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 SEPT1Q8WYJ6 367 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 GPR20Q99678 358 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 VPS16Q9H269 839 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 SPC25Q9HBM1 224 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 PAK6Q9NQU5 681 aaPredicted RBP21.28■■□□□ 1
LMNB1-202ENST00000395354 OLFML3Q9NRN5 406 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 SEL1LQ9UBV2 794 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 DBR1Q9UK59 544 aaKnown RBP21.28■■□□□ 1
LMNB1-202ENST00000395354 ODF2LQ9ULJ1 636 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 PCDHA10Q9Y5I2 948 aa21.28■■□□□ 1
LMNB1-202ENST00000395354 A0A1W2PQC6 194 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 GSTTP1A0A1W2PQM5 241 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 ATG7O95352 703 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 PGK1P00558 417 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 QARSP47897 775 aaKnown RBP21.27■■□□□ 1
LMNB1-202ENST00000395354 LRRC41Q15345 812 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 PPFIBP1Q86W92 1011 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 CNOT6LQ96LI5 555 aaKnown RBP21.27■■□□□ 1
LMNB1-202ENST00000395354 TUBGCP2Q9BSJ2 902 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 WRAP73Q9P2S5 460 aaPredicted RBP21.27■■□□□ 1
LMNB1-202ENST00000395354 CENPFP49454 3210 aa21.27■■□□□ 1
LMNB1-202ENST00000395354 A6NJR5 290 aa21.27■□□□□ 0.99
LMNB1-202ENST00000395354 PPFIA4O75335 1185 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms