RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 TNPO2O14787 897 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 PRPF6O94906 941 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 GH1P01241 217 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 MAPTP10636 758 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 PLS3P13797 630 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 LAMC2Q13753 1193 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 KNOP1Q1ED39 458 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 GJC2Q5T442 439 aaPredicted RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 LRRC55Q6ZSA7 311 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 PLPPR4Q7Z2D5 763 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 REM2Q8IYK8 340 aaPredicted RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 CEP89Q96ST8 783 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 STRA6Q9BX79 667 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 AZI2Q9H6S1 392 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 GPRC5CQ9NQ84 441 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 FLRT1Q9NZU1 646 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 ZSWIM8A7E2V4 1837 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.42■■□□□ 1.18
HDDC3-202ENST00000394272 GOLGA6L6A8MZA4 724 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 PPP1R37O75864 691 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 RGS2P41220 211 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 EEF2KMTQ96G04 330 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 XPNPEP1Q9NQW7 623 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 UBE4BO95155 1302 aa22.42■■□□□ 1.18
HDDC3-202ENST00000394272 IGHA2P01877 340 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 TPM3P06753 285 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 MTERF2Q49AM1 385 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 ZC3H3Q8IXZ2 948 aaKnown RBP22.41■■□□□ 1.18
HDDC3-202ENST00000394272 MCPH1Q8NEM0 835 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 NRBP1Q9UHY1 535 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 TRAF3IP3Q9Y228 551 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 FKBP3Q00688 224 aaKnown RBP22.41■■□□□ 1.18
HDDC3-202ENST00000394272 TARBP2Q15633 366 aaKnown RBP22.41■■□□□ 1.18
HDDC3-202ENST00000394272 EDRF1Q3B7T1 1238 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 DUSP28Q4G0W2 176 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 ZC2HC1CQ53FD0 456 aaPredicted RBP22.41■■□□□ 1.18
HDDC3-202ENST00000394272 FAM102BQ5T8I3 360 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 OLFML2BQ68BL8 750 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 TRIM50Q86XT4 487 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 FAM114A1Q8IWE2 563 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 ANKRD20A12PQ8NF67 263 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 FAM167AQ96KS9 214 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 APBA2Q99767 749 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 ATP6V0A4Q9HBG4 840 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 NRBP2Q9NSY0 501 aa22.41■■□□□ 1.18
HDDC3-202ENST00000394272 ZHX1Q9UKY1 873 aaPredicted RBP22.41■■□□□ 1.18
HDDC3-202ENST00000394272 PDXKO00764 312 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 FGFR1OPO95684 399 aaKnown RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 SMPD1P17405 629 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 CYP2B6P20813 491 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 COPB1P53618 953 aaKnown RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 KCNA1Q09470 495 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 CCL14Q16627 93 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 CCDC144BQ3MJ40 725 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 STXBP4Q6ZWJ1 553 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 VSTM4Q8IW00 320 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 PPTC7Q8NI37 304 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 KIFAP3Q92845 792 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 GLG1Q92896 1179 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 CNOT6LQ96LI5 555 aaKnown RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 DHX33Q9H6R0 707 aaKnown RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 C17orf75Q9HAS0 396 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 RTN4Q9NQC3 1192 aaKnown RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 MAGEC2Q9UBF1 373 aaPredicted RBP22.4■■□□□ 1.18
HDDC3-202ENST00000394272 ZMYM2Q9UBW7 1377 aa22.4■■□□□ 1.18
HDDC3-202ENST00000394272 SLC26A2P50443 739 aa22.39■■□□□ 1.18
HDDC3-202ENST00000394272 ST6GALNAC4Q9H4F1 302 aa22.39■■□□□ 1.18
HDDC3-202ENST00000394272 TYW1Q9NV66 732 aaKnown RBP22.39■■□□□ 1.18
HDDC3-202ENST00000394272 PCDHB13Q9Y5F0 798 aa22.39■■□□□ 1.18
HDDC3-202ENST00000394272 NKRFO15226 690 aaKnown RBP eCLIP22.39■■□□□ 1.17
HDDC3-202ENST00000394272 TEX33O43247 280 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 RTP1P59025 263 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 LACTBP83111 547 aaPredicted RBP22.39■■□□□ 1.17
HDDC3-202ENST00000394272 FILIP1LQ4L180 1135 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 CCDC186Q7Z3E2 898 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 ATP8B4Q8TF62 1192 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 BBXQ8WY36 941 aaPredicted RBP22.39■■□□□ 1.17
HDDC3-202ENST00000394272 SMARCAD1Q9H4L7 1026 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 TAB2Q9NYJ8 693 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 IMPACTQ9P2X3 320 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 PCNTO95613 3336 aa22.39■■□□□ 1.17
HDDC3-202ENST00000394272 K7ENM7 598 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 ADCY6O43306 1168 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 NCKAP1LP55160 1127 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 FCGRTP55899 365 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 PEX3P56589 373 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 SOX10P56693 466 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 ALCAMQ13740 583 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 EMC2Q15006 297 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 TMC6Q7Z403 805 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 CEP63Q96MT8 703 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 PPME1Q9Y570 386 aa22.38■■□□□ 1.17
HDDC3-202ENST00000394272 TGFB1I1O43294 461 aa22.37■■□□□ 1.17
HDDC3-202ENST00000394272 ZNF865P0CJ78 1059 aaPredicted RBP22.37■■□□□ 1.17
HDDC3-202ENST00000394272 PBX1P40424 430 aa22.37■■□□□ 1.17
HDDC3-202ENST00000394272 POLGP54098 1239 aaPredicted RBP22.37■■□□□ 1.17
HDDC3-202ENST00000394272 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
HDDC3-202ENST00000394272 FILIP1Q7Z7B0 1213 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms