RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM45AQ8TCE6 357 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 CNOT6LQ96LI5 555 aaKnown RBP14.27□□□□□ -0.12
USP49-203ENST00000394253 MEIS3Q99687 375 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 CCT7Q99832 543 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 SRLQ86TD4 932 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 SSH2Q76I76 1423 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 B4E1Z4 1266 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 E7ENQ6 273 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 ASNA1O43681 348 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 DCTN2Q13561 401 aaKnown RBP14.27□□□□□ -0.13
USP49-203ENST00000394253 NDUFA13Q9P0J0 144 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 SEC31AO94979 1220 aaKnown RBP14.27□□□□□ -0.13
USP49-203ENST00000394253 CCND1P24385 295 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 PGM1P36871 562 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 KRT74Q7RTS7 529 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 RECQLP46063 649 aaPredicted RBP14.27□□□□□ -0.13
USP49-203ENST00000394253 LBRQ14739 615 aaKnown RBP14.27□□□□□ -0.13
USP49-203ENST00000394253 PRUNE1Q86TP1 453 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 FOXP2O15409 715 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 RAB42Q8N4Z0 105 aa14.27□□□□□ -0.13
USP49-203ENST00000394253 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
USP49-203ENST00000394253 PUDPQ08623 228 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 EXT2Q93063 718 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 ARHGEF16Q5VV41 709 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 DCTPP1Q9H773 170 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 CENPXA8MT69 81 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 IL6P05231 212 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 TSC22D1Q15714 1073 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 THOC7Q6I9Y2 204 aaKnown RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 TAB3Q8N5C8 712 aaPredicted RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 DMAP1Q9NPF5 467 aaPredicted RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 ZC3H7BQ9UGR2 993 aaKnown RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 PDZK1P1A8MUH7 402 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 ENC1O14682 589 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 RABGAP1LQ5R372 815 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 GRM1Q13255 1194 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 UBA2Q9UBT2 640 aaPredicted RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 SYCP2Q9BX26 1530 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 ADRM1Q16186 407 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 PARD6BQ9BYG5 372 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 CYP4F11Q9HBI6 524 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 SERPING1P05155 500 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 ELF1P32519 619 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 TRIM25Q14258 630 aaKnown RBP14.26□□□□□ -0.13
USP49-203ENST00000394253 MICU2Q8IYU8 434 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 RGL1Q9NZL6 768 aa14.26□□□□□ -0.13
USP49-203ENST00000394253 CLASP2O75122 1294 aaKnown RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 MBD4O95243 580 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 RBBP7Q16576 425 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 NEK10Q6ZWH5 1172 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 PCYOX1LQ8NBM8 494 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 G3BP2Q9UN86 482 aaKnown RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 CXCR5P32302 372 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 HADHAP40939 763 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP49-203ENST00000394253 CRYMQ14894 314 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP49-203ENST00000394253 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 NFU1Q9UMS0 254 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 CTIFO43310 598 aaKnown RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 AKAP5P24588 427 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 DYNLT1P63172 113 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 TRIM39Q9HCM9 518 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 LMBRD1Q9NUN5 540 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 HPCAL4Q9UM19 191 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 DSG1Q02413 1049 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 WWP1Q9H0M0 922 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 SMIM31A0A1B0GVY4 71 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 FOSL2P15408 326 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 METTL23Q86XA0 190 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 INTS13Q9NVM9 706 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 KIF24Q5T7B8 1368 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 AKAP10O43572 662 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 ELMSAN1Q6PJG2 1045 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 RHOT2Q8IXI1 618 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 INPP5DQ92835 1189 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 DCTN4Q9UJW0 460 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 A0A0B4J269 797 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 CFAP99D6REC4 459 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 PFKFB1P16118 471 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
USP49-203ENST00000394253 NCKAP1LP55160 1127 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 TUBB3Q13509 450 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 FANCLQ9NW38 375 aa14.25□□□□□ -0.13
USP49-203ENST00000394253 TFDP1Q14186 410 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 TMEM154Q6P9G4 183 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 TTC13Q8NBP0 860 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms