RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 NPEPPSP55786 919 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 TRIM65Q6PJ69 517 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 SMCR8Q8TEV9 937 aaPredicted RBP24.38■■□□□ 1.49
HMGA2-203ENST00000393578 CHP1Q99653 195 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 SH2D3AQ9BRG2 576 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 ZNF408Q9H9D4 720 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 WDR81Q562E7 1941 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 K7ENM7 598 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 CLIC2O15247 247 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 STBD1O95210 358 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 KCNMA1Q12791 1236 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 Q3C1V9 767 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 SEPT14Q6ZU15 432 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 MPHOSPH6Q99547 160 aaKnown RBP24.38■■□□□ 1.49
HMGA2-203ENST00000393578 MROH8Q9H579 483 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 PNMA3Q9UL41 463 aa24.38■■□□□ 1.49
HMGA2-203ENST00000393578 RIOK3O14730 519 aaKnown RBP24.37■■□□□ 1.49
HMGA2-203ENST00000393578 SUPT20HL2P0C7V6 817 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 CDK17Q00537 523 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 KCNH2Q12809 1159 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 SYT10Q6XYQ8 523 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 CYFIP1Q7L576 1253 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 TRMT1LQ7Z2T5 733 aaKnown RBP24.37■■□□□ 1.49
HMGA2-203ENST00000393578 KSR1Q8IVT5 923 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 CCDC60Q8IWA6 550 aaPredicted RBP24.37■■□□□ 1.49
HMGA2-203ENST00000393578 CCDC155Q8N6L0 562 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 SLC17A8Q8NDX2 589 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 NEK11Q8NG66 645 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 GTF3C2Q8WUA4 911 aaPredicted RBP24.37■■□□□ 1.49
HMGA2-203ENST00000393578 ST6GALNAC4Q9H4F1 302 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 DOCK5Q9H7D0 1870 aa24.37■■□□□ 1.49
HMGA2-203ENST00000393578 EPHB6O15197 1021 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 ATG7O95352 703 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 XRCC5P13010 732 aaKnown RBP24.36■■□□□ 1.49
HMGA2-203ENST00000393578 HNRNPH3P31942 346 aaKnown RBP24.36■■□□□ 1.49
HMGA2-203ENST00000393578 FKBP1BP68106 108 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 SP4Q02446 784 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 MKNK1Q9BUB5 465 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 R3HDMLQ9H3Y0 253 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 TMEM206Q9H813 350 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 AGPAT3Q9NRZ7 376 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 TELO2Q9Y4R8 837 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 EPN1Q9Y6I3 576 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-203ENST00000393578 TGFB3P10600 412 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 GTF2F1P35269 517 aaKnown RBP eCLIP24.36■■□□□ 1.495e-12■■□□□ 13.3
HMGA2-203ENST00000393578 KCTD2Q14681 263 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 SYCP3Q8IZU3 236 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 CEP170P1Q96L14 293 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 DMAC2Q9NW81 257 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 PLAGL2Q9UPG8 496 aa24.36■■□□□ 1.49
HMGA2-203ENST00000393578 PHLPP2Q6ZVD8 1323 aa24.35■■□□□ 1.49
HMGA2-203ENST00000393578 IGSF9BQ9UPX0 1349 aa24.35■■□□□ 1.49
HMGA2-203ENST00000393578 NDUFA10O95299 355 aa24.35■■□□□ 1.49
HMGA2-203ENST00000393578 PSMC2P35998 433 aaKnown RBP24.35■■□□□ 1.49
HMGA2-203ENST00000393578 CASP4P49662 377 aa24.35■■□□□ 1.49
HMGA2-203ENST00000393578 IKZF4Q9H2S9 585 aa24.35■■□□□ 1.49
HMGA2-203ENST00000393578 DNAJC25-GNG10A0A024R161 153 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 AFPP02771 609 aaKnown RBP24.34■■□□□ 1.49
HMGA2-203ENST00000393578 ERVK-9P63128 1117 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 PRKCEQ02156 737 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 MYBPC2Q14324 1141 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 FAM102BQ5T8I3 360 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 SLC9A9Q8IVB4 645 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 SHCBP1Q8NEM2 672 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 TMEM174Q8WUU8 243 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 BORCS6Q96GS4 357 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 ACCSQ96QU6 501 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 MMP19Q99542 508 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 GPRC5CQ9NQ84 441 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 SYNGAP1Q96PV0 1343 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 CETPP11597 493 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 UBA1P22314 1058 aaKnown RBP24.34■■□□□ 1.49
HMGA2-203ENST00000393578 GTF2BQ00403 316 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 XKR3Q5GH77 459 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 CCDC170Q8IYT3 715 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 KIFAP3Q92845 792 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 C17orf75Q9HAS0 396 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 CGNQ9P2M7 1197 aaKnown RBP24.34■■□□□ 1.49
HMGA2-203ENST00000393578 SLC45A1Q9Y2W3 748 aa24.34■■□□□ 1.49
HMGA2-203ENST00000393578 SORBS3O60504 671 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 DGAT1O75907 488 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 PGK2P07205 417 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 NCKAP1LP55160 1127 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 PEX3P56589 373 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 NEDD9Q14511 834 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 HAUS6Q7Z4H7 955 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 FAM186BQ8IYM0 893 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 ACRBPQ8NEB7 543 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 CEP72Q9P209 647 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 DNAI1Q9UI46 699 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 FRMD4BQ9Y2L6 1034 aa24.33■■□□□ 1.49
HMGA2-203ENST00000393578 MAFBQ9Y5Q3 323 aaPredicted RBP24.33■■□□□ 1.49
HMGA2-203ENST00000393578 GTF2A2P52657 109 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 CACNA2D4Q7Z3S7 1137 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 MCPH1Q8NEM0 835 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 BAP1Q92560 729 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 SLC35C1Q96A29 364 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 MS4A4AQ96JQ5 239 aa24.33■■□□□ 1.48
HMGA2-203ENST00000393578 NUCKS1Q9H1E3 243 aaKnown RBP24.33■■□□□ 1.48
HMGA2-203ENST00000393578 ZNF302Q9NR11 478 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms