RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 TPBGLP0DKB5 382 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 RBBP8NLQ8NC74 664 aaPredicted RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 IRGQQ8WZA9 623 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 GFM2Q969S9 779 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 E7ENQ6 273 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 CDK4P11802 303 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 EPHB4P54760 987 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 GBE1Q04446 702 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 AIMP1Q12904 312 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 DCTN2Q13561 401 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 C15orf59Q2T9L4 293 aaPredicted RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 STK32AQ8WU08 396 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 SCG3Q8WXD2 468 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
LAMB1-203ENST00000393560 DDX18Q9NVP1 670 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 DMGDHQ9UI17 866 aaKnown RBP12.28□□□□□ -0.44
LAMB1-203ENST00000393560 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 SERPINB6P35237 376 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 RCVRNP35243 200 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 NAA20P61599 178 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 COX10Q12887 443 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.44
LAMB1-203ENST00000393560 MTMR3Q13615 1198 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 CACNA2D4Q7Z3S7 1137 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.27□□□□□ -0.44
LAMB1-203ENST00000393560 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 CDK5RAP3Q96JB5 506 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 UROC1Q96N76 676 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.44
LAMB1-203ENST00000393560 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.44
LAMB1-203ENST00000393560 PXDNQ92626 1479 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 PABPN1LA6NDY0 278 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 GOLGA8HP0CJ92 632 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 CCNCP24863 283 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 KIF23Q02241 960 aaPredicted RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 RNASELQ05823 741 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 PATL1Q86TB9 770 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 NOP9Q86U38 636 aaKnown RBP12.27□□□□□ -0.45
LAMB1-203ENST00000393560 ANKMY2Q8IV38 441 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 GATA6Q92908 595 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 ANKRD36BP1Q96IX9 119 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 STK33Q9BYT3 514 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 INTS13Q9NVM9 706 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 NMRK1Q9NWW6 199 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
LAMB1-203ENST00000393560 TRPM3Q9HCF6 1732 aaPredicted RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PCP11498 1178 aaKnown RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PPP1R2P41236 205 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 TXKP42681 527 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PRR23CQ6ZRP0 262 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 GAB3Q8WWW8 586 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 MTMR12Q9C0I1 747 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 NSRP1Q9H0G5 558 aaKnown RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 CLIC5Q9NZA1 410 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 SLC12A6Q9UHW9 1150 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 SLIT3O75094 1523 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ZBED4O75132 1171 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ZNF254O75437 659 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 TSPAN9O75954 239 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 EIF2B2P49770 351 aaKnown RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 TUBA4AP68366 448 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 C10orf62Q5T681 223 aaPredicted RBP12.26□□□□□ -0.45
LAMB1-203ENST00000393560 EMBQ6PCB8 327 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 IQCKQ8N0W5 287 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 NUDCD1Q96RS6 583 aa12.26□□□□□ -0.45
LAMB1-203ENST00000393560 ALDH8A1Q9H2A2 487 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms