RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ABHD14A-ACY1A0A1B0GW23 586 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 VWA3AA6NCI4 1184 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 EFCAB14O75071 495 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 VTNP04004 478 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 ZSCAN22P10073 491 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 GHRP10912 638 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 RFC5P40937 340 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 POLGP54098 1239 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 FBXO47Q5MNV8 452 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 FOXD4L5Q5VV16 416 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 ZNF579Q8NAF0 562 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 USP38Q8NB14 1042 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 SNX29Q8TEQ0 813 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 PIGOQ8TEQ8 1089 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 FOXD4L4Q8WXT5 416 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 CXXC1Q9P0U4 656 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 GINS2Q9Y248 185 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 CLIC4Q9Y696 253 aa21.21■□□□□ 0.99
PDLIM7-204ENST00000393546 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 CDC42EP1Q00587 391 aa21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 LPIN1Q14693 890 aa21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 TSHZ1Q6ZSZ6 1077 aa21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 APBB2Q92870 758 aa21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 IFIH1Q9BYX4 1025 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 OSBPL7Q9BZF2 842 aa21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 DHX33Q9H6R0 707 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-204ENST00000393546 A0A087WWV3 80 aa21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 KCNJ6P48051 423 aa21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 CRYBB1P53674 252 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 NLRP11P59045 1033 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 KIZQ2M2Z5 673 aa21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 POTEGQ6S5H5 508 aa21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 ZNF396Q96N95 335 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 CDHR5Q9HBB8 845 aa21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 SUCLA2Q9P2R7 463 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 DBR1Q9UK59 544 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-204ENST00000393546 PP2D1A8MPX8 630 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 GAS2O43903 313 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 GPR32O75388 356 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 F13A1P00488 732 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 CDC25AP30304 524 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 RARRES1P49788 294 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 CEBPZQ03701 1054 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 MKRN4PQ13434 485 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 TCTN1Q2MV58 587 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 ODR4Q5SWX8 454 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 TCP11Q8WWU5 503 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 AK8Q96MA6 479 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 PPP1R16BQ96T49 567 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 KIAA1024Q9UPX6 916 aa21.18■□□□□ 0.98
PDLIM7-204ENST00000393546 DGAT1O75907 488 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 CD52P31358 61 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 SMAD3P84022 425 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 DRP2Q13474 957 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 PTPAQ15257 358 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 ECM1Q16610 540 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 PHOSPHO2Q8TCD6 241 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 SCLT1Q96NL6 688 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 USP28Q96RU2 1077 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 MTRQ99707 1265 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 ADAMTS10Q9H324 1103 aa21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 AGO3Q9H9G7 860 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 DDX19AQ9NUU7 478 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-204ENST00000393546 SOX1O00570 391 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 RPS6KA5O75582 802 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 ATP2A2P16615 1042 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 LONP1P36776 959 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 FXR1P51114 621 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 GPC3P51654 580 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 WDR5P61964 334 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 PAK2Q13177 524 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 EMC2Q15006 297 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 RHPN2Q8IUC4 686 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 NLRP7Q8WX94 980 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 TMEM143Q96AN5 459 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 SLC9A7Q96T83 725 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 OSMRQ99650 979 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 MMTAG2Q9BU76 263 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 ATP6V0A4Q9HBG4 840 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 BMP2KQ9NSY1 1161 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 PADI3Q9ULW8 664 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 DNM3Q9UQ16 869 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 NOC2LQ9Y3T9 749 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 LOXHD1Q8IVV2 1947 aa21.16■□□□□ 0.98
PDLIM7-204ENST00000393546 ARHGEF35A5YM69 484 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 GPR182O15218 404 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 ASAP2O43150 1006 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 MARCKSP29966 332 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 UBA7P41226 1012 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 PKP1Q13835 747 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 SLC39A14Q15043 492 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 FAM43BQ6ZT52 329 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 KCTD17Q8N5Z5 321 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 PSPC1Q8WXF1 523 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 LRCH3Q96II8 777 aa21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 ZNF668Q96K58 619 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 TFIP11Q9UBB9 837 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-204ENST00000393546 SRPRBQ9Y5M8 271 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms