RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TECP42680 631 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 EPHA7Q15375 998 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 RAB30Q15771 203 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 XKR3Q5GH77 459 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 IER5Q5VY09 327 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 EFCAB12Q6NXP0 572 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 FERMT3Q86UX7 667 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 TPH2Q8IWU9 490 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 LINC01465Q8N7H1 131 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 MYLIPQ8WY64 445 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 CDX2Q99626 313 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 EIF2AK1Q9BQI3 630 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 CELF4Q9BZC1 486 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 TMX1Q9H3N1 280 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 MSRAQ9UJ68 235 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 PADI3Q9ULW8 664 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 NOC2LQ9Y3T9 749 aaKnown RBP8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
HMGB3P1-201ENST00000393368 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PP2D1A8MPX8 630 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 K7ELQ4 463 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 RFXAPO00287 272 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 TLL1O43897 1013 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 MGEA5O60502 916 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 GPR32O75388 356 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 MED24O75448 989 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 CSDE1O75534 798 aaKnown RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 GJB5O95377 273 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 AMHP03971 560 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 FGFR4P22455 802 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 YWHABP31946 246 aaKnown RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 NLRP11P59045 1033 aaKnown RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PAK2Q13177 524 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 TSHZ1Q6ZSZ6 1077 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 KSR1Q8IVT5 923 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 C4orf32Q8N8J7 132 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PHOSPHO2Q8TCD6 241 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PIGOQ8TEQ8 1089 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 CEP170P1Q96L14 293 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 MAP7D2Q96T17 732 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 ZBED2Q9BTP6 218 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PRDM12Q9H4Q4 367 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 SLC28A3Q9HAS3 691 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 CYP26B1Q9NR63 512 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 MTUS1Q9ULD2 1270 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 PCDHA11Q9Y5I1 949 aa8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 SPTBN5Q9NRC6 3674 aaKnown RBP8.59□□□□□ -1.03
HMGB3P1-201ENST00000393368 EPOPA6NHQ4 379 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 MAGEB2O15479 319 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 MAFO75444 373 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 RPS6KA5O75582 802 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 SPATA31C1P0DKV0 1188 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 TRAPPC10P48553 1259 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 GATMP50440 423 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 GPC3P51654 580 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 POLGP54098 1239 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 TAP1Q03518 808 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 PTGDRQ13258 359 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 IL17AQ16552 155 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 XKR9Q5GH70 373 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 FAM173BQ6P4H8 233 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 RTN4RL1Q86UN2 441 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 FAM228AQ86W67 206 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 C4orf19Q8IY42 314 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 NME8Q8N427 588 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 APBB2Q92870 758 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 TMEM143Q96AN5 459 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 SCLT1Q96NL6 688 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 HSD17B14Q9BPX1 270 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 ADAMTS10Q9H324 1103 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 ZSWIM4Q9H7M6 989 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 ERVK-5Q9HDB9 667 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 ST3GAL5Q9UNP4 418 aa8.58□□□□□ -1.04
HMGB3P1-201ENST00000393368 GBF1Q92538 1859 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 KDM3AQ9Y4C1 1321 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 A0A087WZ62 844 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 IGKV6-21A0A0C4DH24 114 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 ENPP3O14638 875 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 EFCAB14O75071 495 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 GABBR2O75899 941 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 RPLP2P05387 115 aaKnown RBP8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 FOSL2P15408 326 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 TMOD1P28289 359 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 CDC25AP30304 524 aa8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 CRYBB1P53674 252 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P1-201ENST00000393368 ADGRE1Q14246 886 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms