RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GDF6Q6KF10 455 aaPredicted RBP14.77□□□□□ -0.04
USP44-202ENST00000393091 KRBA2Q6ZNG9 492 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 C7orf31Q8N865 590 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 DNAJC19Q96DA6 116 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 MTRQ99707 1265 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.04
USP44-202ENST00000393091 KIAA0355O15063 1070 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 NCLP19338 710 aaKnown RBP14.77□□□□□ -0.05
USP44-202ENST00000393091 MAPK7Q13164 816 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.05
USP44-202ENST00000393091 SLC17A8Q8NDX2 589 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 GOLGA6L22H0YM25 854 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
USP44-202ENST00000393091 FSIP1Q8NA03 581 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 SPIRE2Q8WWL2 714 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 KIFAP3Q92845 792 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 STRA6Q9BX79 667 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 ATP6V0A4Q9HBG4 840 aa14.77□□□□□ -0.05
USP44-202ENST00000393091 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 GADD45BO75293 160 aaPredicted RBP14.76□□□□□ -0.05
USP44-202ENST00000393091 ZNF202O95125 648 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 SYKP43405 635 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 AMPD3Q01432 767 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 CYP4A11Q02928 519 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 RETREG2Q8NC44 543 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 CDK5RAP3Q96JB5 506 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 E9PMD0 336 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 MBD3O95983 291 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 CDC25AP30304 524 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 STAT6P42226 847 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 SV2BQ7L1I2 683 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 ZNF410Q86VK4 478 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 DIS3LQ8TF46 1054 aaKnown RBP14.76□□□□□ -0.05
USP44-202ENST00000393091 DHX38Q92620 1227 aaKnown RBP14.76□□□□□ -0.05
USP44-202ENST00000393091 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
USP44-202ENST00000393091 TBX21Q9UL17 535 aa14.76□□□□□ -0.05
USP44-202ENST00000393091 EN2P19622 333 aaPredicted RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 EMC2Q15006 297 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 PADI6Q6TGC4 694 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 POLR2DO15514 142 aaKnown RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 RFC2P35250 354 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 SARSP49591 514 aaKnown RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 GIT2Q14161 759 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 MXD4Q14582 209 aaPredicted RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 KCNB1Q14721 858 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 PAGE5Q96GU1 130 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 CEP170P1Q96L14 293 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 ADAMTS10Q9H324 1103 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 TLR3O15455 904 aaKnown RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
USP44-202ENST00000393091 B4GALT4O60513 344 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 FAM187BQ17R55 369 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 LONRF3Q496Y0 759 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 FOXR2Q6PJQ5 311 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 DAW1Q8N136 415 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 UIMC1Q96RL1 719 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 OLFML3Q9NRN5 406 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 TRPC6Q9Y210 931 aa14.75□□□□□ -0.05
USP44-202ENST00000393091 PDCD11Q14690 1871 aaKnown RBP14.74□□□□□ -0.05
USP44-202ENST00000393091 A0A1B0GVL5 298 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 ZBTB39O15060 712 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 SORBS3O60504 671 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 GPR32O75388 356 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 GAP43P17677 238 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 KLRC1P26715 233 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 FAAP100Q0VG06 881 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 DPYDQ12882 1025 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 LRRC26Q2I0M4 334 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 XKR9Q5GH70 373 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 SPECC1Q5M775 1068 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 TNS4Q8IZW8 715 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 HVCN1Q96D96 273 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 PAWRQ96IZ0 340 aaKnown RBP14.74□□□□□ -0.05
USP44-202ENST00000393091 DRC1Q96MC2 740 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 TRIM9Q9C026 710 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 PRPF40AO75400 957 aaKnown RBP14.74□□□□□ -0.05
USP44-202ENST00000393091 NCKAP1LP55160 1127 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 SP4Q02446 784 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 FOXD4L6Q3SYB3 417 aaPredicted RBP14.74□□□□□ -0.05
USP44-202ENST00000393091 FOXD4L3Q6VB84 417 aaPredicted RBP14.74□□□□□ -0.05
USP44-202ENST00000393091 FIZ1Q96SL8 496 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 RUSC1Q9BVN2 902 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 SETD4Q9NVD3 440 aa14.74□□□□□ -0.05
USP44-202ENST00000393091 UBE4BO95155 1302 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 KLRC4O43908 158 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 MCCD1P59942 119 aaPredicted RBP14.73□□□□□ -0.05
USP44-202ENST00000393091 PSMD2Q13200 908 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 PTGISQ16647 500 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 PIGOQ8TEQ8 1089 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 SLC7A3Q8WY07 619 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 MYMKA6NI61 221 aa14.73□□□□□ -0.05
USP44-202ENST00000393091 LIG1P18858 919 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms