RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 GCLMP48507 274 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CDC42EP1Q00587 391 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CEP57Q86XR8 500 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CCDC170Q8IYT3 715 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 CALN1Q9BXU9 219 aa11.09□□□□□ -0.63
PKP4-201ENST00000389757 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 EYA4O95677 639 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 YWHABP31946 246 aaKnown RBP11.08□□□□□ -0.64
PKP4-201ENST00000389757 ECE1P42892 770 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 GUCY2FP51841 1108 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 MUM1L1Q5H9M0 696 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 MAGOHBQ96A72 148 aaKnown RBP11.08□□□□□ -0.64
PKP4-201ENST00000389757 ZDHHC15Q96MV8 337 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 MCF2LO15068 1137 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 PDIA5Q14554 519 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 KYAT1Q16773 422 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 KCTD6Q8NC69 237 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 MTIF3Q9H2K0 278 aaKnown RBP11.08□□□□□ -0.64
PKP4-201ENST00000389757 ANAPC5Q9UJX4 755 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 CHGBP05060 677 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 ZNF394Q53GI3 561 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 SCN4BQ8IWT1 228 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 CDKL2Q92772 493 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 ATG4CQ96DT6 458 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 SCINQ9Y6U3 715 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 RGS16O15492 202 aaPredicted RBP11.08□□□□□ -0.64
PKP4-201ENST00000389757 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
PKP4-201ENST00000389757 PTPN21Q16825 1174 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
PKP4-201ENST00000389757 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 CASP1P29466 404 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 GOLGA8FQ08AF8 430 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 GOLGA8DPQ0D2H9 430 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 TMEM35BQ8NCS4 154 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 IQGAP1P46940 1657 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 A6NNZ2 444 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 BCL9O00512 1426 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 HIP1RO75146 1068 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 CXCL9Q07325 125 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 TUBB8Q3ZCM7 444 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 HAUS6Q7Z4H7 955 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 PHLDB2Q86SQ0 1253 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 TIPINQ9BVW5 301 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
PKP4-201ENST00000389757 DEPDC5O75140 1603 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 LRRD1A4D1F6 860 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 TBX3O15119 743 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 RGL2O15211 777 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 DGAT1O75907 488 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 ZNF18P17022 549 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 CAP2P40123 477 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
PKP4-201ENST00000389757 ACTN1P12814 892 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 VAMP7P51809 220 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 NAALADL2Q58DX5 795 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 TTC39CQ8N584 583 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 SCFD2Q8WU76 684 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
PKP4-201ENST00000389757 SUCLA2Q9P2R7 463 aaPredicted RBP11.07□□□□□ -0.64
PKP4-201ENST00000389757 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
PKP4-201ENST00000389757 RGL1Q9NZL6 768 aa11.07□□□□□ -0.64
PKP4-201ENST00000389757 PLSCR1O15162 318 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 RARBP10826 455 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 VEGFAP15692 232 aaPredicted RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 TBXAS1P24557 533 aaPredicted RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 FCGRTP55899 365 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
PKP4-201ENST00000389757 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.06□□□□□ -0.64
PKP4-201ENST00000389757 JMJD4Q9H9V9 463 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 GARSP41250 739 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 PRCPP42785 496 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 DYNLT1P63172 113 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 XRRA1Q6P2D8 792 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 ALKBH5Q6P6C2 394 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 SLC35F6Q8N357 371 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 AGO2Q9UKV8 859 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 EFCAB13Q8IY85 973 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 GPD1LQ8N335 351 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 SKA2Q8WVK7 121 aaPredicted RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 NGRNQ9NPE2 291 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 DONSONQ9NYP3 566 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 RBAKQ9NYW8 714 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms