RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
CTNS-202ENST00000381870 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
CTNS-202ENST00000381870 GPR75-ASB3A0A0A6YYF3 556 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 FLOT1O75955 427 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 WFS1O76024 890 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 TRIM59Q8IWR1 403 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 MYOCDQ8IZQ8 938 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 DRAXINQ8NBI3 349 aaPredicted RBP16.22■□□□□ 0.19
CTNS-202ENST00000381870 DDX12PQ92771 950 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 PLCD4Q9BRC7 762 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 TBC1D7Q9P0N9 293 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 ASB3Q9Y575 518 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 FOXO6A8MYZ6 492 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 KIAA0391O15091 583 aaKnown RBP16.22■□□□□ 0.19
CTNS-202ENST00000381870 PDE8AO60658 829 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 PYGLP06737 847 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 CCNB1P14635 433 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTNS-202ENST00000381870 LAMB3Q13751 1172 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
CTNS-202ENST00000381870 KIAA1755Q5JYT7 1200 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 NELFCDQ8IXH7 590 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 PROM2Q8N271 834 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 RPS6KC1Q96S38 1066 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 RNPEPL1Q9HAU8 725 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 PRKAG3Q9UGI9 489 aa16.22■□□□□ 0.19
CTNS-202ENST00000381870 RASGRF2O14827 1237 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 PEX11AO75192 247 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 NPTXRO95502 500 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 CYP2D6P10635 497 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 SLC9A1P19634 815 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 CALB2P22676 271 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 GBP1P32455 592 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 MRPS35P82673 323 aaKnown RBP16.21■□□□□ 0.19
CTNS-202ENST00000381870 TNFAIP8L3Q5GJ75 292 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 TMEM154Q6P9G4 183 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 BARGINQ6ZT62 677 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 JAMLQ86YT9 394 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 LMNTD2Q8IXW0 634 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 DAGLBQ8NCG7 672 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 GDAP1Q8TB36 358 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 FBF1Q8TES7 1133 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 BRIP1Q9BX63 1249 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 OSGEPQ9NPF4 335 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 DCCP43146 1447 aa16.21■□□□□ 0.19
CTNS-202ENST00000381870 CYTH3O43739 400 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 GM2AP17900 193 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 ATP6V1C1P21283 382 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 ZNF211Q13398 564 aaPredicted RBP16.21■□□□□ 0.18
CTNS-202ENST00000381870 RNF220Q5VTB9 566 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 CGB2Q6NT52 195 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 MTHFD1LQ6UB35 978 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 ANKRD42Q8N9B4 389 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 RBM46Q8TBY0 533 aaKnown RBP16.21■□□□□ 0.18
CTNS-202ENST00000381870 CRAMP1Q96RY5 1269 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 GRHL1Q9NZI5 618 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 ARAP2Q8WZ64 1704 aa16.21■□□□□ 0.18
CTNS-202ENST00000381870 TMEM120BA0PK00 339 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 O00370 1275 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 EPS15P42566 896 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 TAOK1Q7L7X3 1001 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 DNAJC10Q8IXB1 793 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 EPAS1Q99814 870 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 NUDT12Q9BQG2 462 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
CTNS-202ENST00000381870 PPP1R9AQ9ULJ8 1098 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 CASZ1Q86V15 1759 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 DDX3YO15523 660 aaKnown RBP16.2■□□□□ 0.18
CTNS-202ENST00000381870 UNC5CO95185 931 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 GH1P01241 217 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 H2AFZP0C0S5 128 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 TPBGLP0DKB5 382 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 ALDH3A1P30838 453 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 RFC5P40937 340 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 H2AFVQ71UI9 128 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
CTNS-202ENST00000381870 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 TRIM7Q9C029 511 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 BARHL2Q9NY43 387 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 WDR35Q9P2L0 1181 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 AMFRQ9UKV5 643 aa16.2■□□□□ 0.18
CTNS-202ENST00000381870 COL22A1Q8NFW1 1626 aaPredicted RBP16.2■□□□□ 0.18
CTNS-202ENST00000381870 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 RIPK2O43353 540 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 RNF8O76064 485 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 SP100P23497 879 aaPredicted RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 RPL21P46778 160 aaKnown RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 KCNH2Q12809 1159 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 LONRF1Q17RB8 773 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms