RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CLTBP09497 229 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 TRIM71Q2Q1W2 868 aaKnown RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 METTL13Q8N6R0 699 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 RETREG2Q8NC44 543 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 DHX38Q92620 1227 aaKnown RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 WNT8BQ93098 351 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 GBP4Q96PP9 640 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 TMEM39AQ9NV64 488 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 STK17AQ9UEE5 414 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 CYP11B2P19099 503 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 STAT6P42226 847 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 NDUFA8P51970 172 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 POLGP54098 1239 aaPredicted RBP17.21■□□□□ 0.35
PDGFB-202ENST00000381551 MCM6Q14566 821 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 RINT1Q6NUQ1 792 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 C1orf186Q6ZWK4 172 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 NME8Q8N427 588 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
PDGFB-202ENST00000381551 DPF3Q92784 378 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
PDGFB-202ENST00000381551 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
PDGFB-202ENST00000381551 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 KIAA0355O15063 1070 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 EVI5O60447 810 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 SSBP05455 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 TMOD1P28289 359 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 DRP2Q13474 957 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 DHX8Q14562 1220 aaKnown RBP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 EMC2Q15006 297 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 ARSHQ5FYA8 562 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 TRIM43Q96BQ3 446 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 DHX58Q96C10 678 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 MTRQ99707 1265 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 FAM49AQ9H0Q0 323 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 ATP6V0A4Q9HBG4 840 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-202ENST00000381551 EVPLQ92817 2033 aa17.2■□□□□ 0.34
PDGFB-202ENST00000381551 ALPK3Q96L96 1907 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
PDGFB-202ENST00000381551 USO1O60763 962 aaKnown RBP17.19■□□□□ 0.34
PDGFB-202ENST00000381551 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
PDGFB-202ENST00000381551 ARL2P36404 184 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 THPOP40225 353 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 SYKP43405 635 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 DNM2P50570 870 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 CLCN3P51790 818 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 RBL2Q08999 1139 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 BFSP2Q13515 415 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 LONRF3Q496Y0 759 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 IER5Q5VY09 327 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 C7orf61Q8IZ16 206 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 KBTBD4Q9NVX7 518 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
PDGFB-202ENST00000381551 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-202ENST00000381551 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 CAND2O75155 1236 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 ZNF202O95125 648 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 CKBP12277 381 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 UBE2HP62256 183 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 SNW1Q13573 536 aaKnown RBP17.18■□□□□ 0.34
PDGFB-202ENST00000381551 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 RSPH3Q86UC2 560 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
PDGFB-202ENST00000381551 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 TCP11Q8WWU5 503 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 PRPF31Q8WWY3 499 aaKnown RBP17.18■□□□□ 0.34
PDGFB-202ENST00000381551 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
PDGFB-202ENST00000381551 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 ACTN4O43707 911 aaKnown RBP17.17■□□□□ 0.34
PDGFB-202ENST00000381551 TIMP1P01033 207 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 GUCY2CP25092 1073 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 ITGB8P26012 769 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms