RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 BAIAP3O94812 1187 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 LYPLA2O95372 231 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 CLCN3P51790 818 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
SNRPB-201ENST00000381342 TBC1D8BQ0IIM8 1120 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 STK38Q15208 465 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 ECM1Q16610 540 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 TRAF7Q6Q0C0 670 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 LRRC71Q8N4P6 559 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 PHOSPHO2Q8TCD6 241 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 CDX2Q99626 313 aaPredicted RBP18.06■□□□□ 0.48
SNRPB-201ENST00000381342 CYP26B1Q9NR63 512 aa18.06■□□□□ 0.48
SNRPB-201ENST00000381342 BMP2KQ9NSY1 1161 aaPredicted RBP18.06■□□□□ 0.48
SNRPB-201ENST00000381342 SMIM35A0A1B0GVV1 85 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 EFCAB14O75071 495 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 XKR9Q5GH70 373 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 METTL13Q8N6R0 699 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
SNRPB-201ENST00000381342 GUCD1Q96NT3 240 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 CLIC6Q96NY7 704 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 CSRNP2Q9H175 543 aa18.05■□□□□ 0.48
SNRPB-201ENST00000381342 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
SNRPB-201ENST00000381342 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
SNRPB-201ENST00000381342 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 CAND2O75155 1236 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 YEATS4O95619 227 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 FOSL2P15408 326 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 LONP1P36776 959 aaKnown RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 PBX2P40425 430 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 TMEM62Q0P6H9 643 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 MBTPS1Q14703 1052 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 OTUD6AQ7L8S5 288 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 RSPH3Q86UC2 560 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 LINC01465Q8N7H1 131 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 AK8Q96MA6 479 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 GAS2L1Q99501 681 aaPredicted RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 DDX19AQ9NUU7 478 aaKnown RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 KIAA1024Q9UPX6 916 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 PCDHA11Q9Y5I1 949 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 STK24Q9Y6E0 443 aa18.04■□□□□ 0.48
SNRPB-201ENST00000381342 MORC2Q9Y6X9 1032 aaPredicted RBP18.04■□□□□ 0.48
SNRPB-201ENST00000381342 KDM3AQ9Y4C1 1321 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 SPTLC2O15270 562 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 MAGEB2O15479 319 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 VTNP04004 478 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 NCLP19338 710 aaKnown RBP18.03■□□□□ 0.48
SNRPB-201ENST00000381342 RARRES1P49788 294 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
SNRPB-201ENST00000381342 NUCB2P80303 420 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 MRPS6P82932 125 aaKnown RBP18.03■□□□□ 0.48
SNRPB-201ENST00000381342 MGAT3Q09327 533 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 DRP2Q13474 957 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 IKBKEQ14164 716 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 SPECC1Q5M775 1068 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 RPAINQ86UA6 219 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 CABP7Q86V35 215 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 KIAA0319LQ8IZA0 1049 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
SNRPB-201ENST00000381342 MYLIPQ8WY64 445 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 PPP1R16BQ96T49 567 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 PLIN2Q99541 437 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 NKX2-4Q9H2Z4 354 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 CDY2AQ9Y6F7 541 aa18.03■□□□□ 0.48
SNRPB-201ENST00000381342 ABHD14A-ACY1A0A1B0GW23 586 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 MAFO75444 373 aaPredicted RBP18.02■□□□□ 0.48
SNRPB-201ENST00000381342 CHRNA1P02708 482 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 MUTP22033 750 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 RFC5P40937 340 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 GRB10Q13322 594 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 GPNMBQ14956 572 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 EMC2Q15006 297 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 ATL3Q6DD88 541 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 KCNK18Q7Z418 384 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 SLC7A3Q8WY07 619 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 VWCEQ96DN2 955 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 PNMA5Q96PV4 448 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 NACC1Q96RE7 527 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 ZBED2Q9BTP6 218 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 OSBPL7Q9BZF2 842 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 DHX33Q9H6R0 707 aaKnown RBP18.02■□□□□ 0.48
SNRPB-201ENST00000381342 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
SNRPB-201ENST00000381342 IGKV6-21A0A0C4DH24 114 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 E9PMD0 336 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
SNRPB-201ENST00000381342 NBNO60934 754 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms