RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MKL1Q969V6 931 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 INO80BQ9C086 356 aaPredicted RBP13.59□□□□□ -0.23
CDX2-201ENST00000381020 PNMA2Q9UL42 364 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 NID2Q14112 1375 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 ROBO3Q96MS0 1386 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 KIAA0754O94854 1291 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 HEXIM1O94992 359 aaKnown RBP13.59□□□□□ -0.23
CDX2-201ENST00000381020 ABL1P00519 1130 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 PSAPP07602 524 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 VPS41P49754 854 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 COG2Q14746 738 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 LMBRD2Q68DH5 695 aaPredicted RBP13.59□□□□□ -0.23
CDX2-201ENST00000381020 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 FAM76AQ8TAV0 307 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 HOXC10Q9NYD6 342 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 MTUS1Q9ULD2 1270 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 PLAGL2Q9UPG8 496 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 EMSYQ7Z589 1322 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 TAF1P21675 1872 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 ESYT3A0FGR9 886 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 LRRC10BA6NIK2 292 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 VSNL1P62760 191 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 RASAL2Q9UJF2 1139 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
CDX2-201ENST00000381020 K7ERI5 159 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
CDX2-201ENST00000381020 LMNB1P20700 586 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 PSMC5P62195 406 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 KRT76Q01546 638 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 PAK2Q13177 524 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 CCDC105Q8IYK2 499 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
CDX2-201ENST00000381020 ITGB4P16144 1822 aa13.58□□□□□ -0.23
CDX2-201ENST00000381020 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 PDE6CP51160 858 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 CASP5P51878 434 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
CDX2-201ENST00000381020 CASP8Q14790 479 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 MIS18BP1Q6P0N0 1132 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 UHMK1Q8TAS1 419 aaKnown RBP13.58□□□□□ -0.24
CDX2-201ENST00000381020 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 FAM213AQ9BRX8 229 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 NRBP2Q9NSY0 501 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 STRCQ7RTU9 1775 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDX2-201ENST00000381020 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
CDX2-201ENST00000381020 OSBPL9Q96SU4 736 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 EHD2Q9NZN4 543 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
CDX2-201ENST00000381020 CEP83Q9Y592 693 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 AKAP3O75969 853 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 ICAM1P05362 532 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 KCTD16Q68DU8 428 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 INTS8Q75QN2 995 aaKnown RBP13.58□□□□□ -0.24
CDX2-201ENST00000381020 DNAJC7Q99615 494 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 ARHGAP20Q9P2F6 1191 aa13.58□□□□□ -0.24
CDX2-201ENST00000381020 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CDX2-201ENST00000381020 VAMP7P51809 220 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 JAK3P52333 1124 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 STXBP2Q15833 593 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 FAN1Q9Y2M0 1017 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 EPHB6O15197 1021 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 VCAM1P19320 739 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 PIK3CAP42336 1068 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 ZNF653Q96CK0 615 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 TEX13BQ9BXU2 312 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 ACAD9Q9H845 621 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 A0A087X0T9 212 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
CDX2-201ENST00000381020 FAM228BP0C875 321 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 MFAP3P55082 362 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 PROCA1Q8NCQ7 364 aaPredicted RBP13.57□□□□□ -0.24
CDX2-201ENST00000381020 POLR3CQ9BUI4 534 aaPredicted RBP13.57□□□□□ -0.24
CDX2-201ENST00000381020 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
CDX2-201ENST00000381020 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 KLRC1P26715 233 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 PTK2Q05397 1052 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 NLRP4Q96MN2 994 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 INTS2Q9H0H0 1204 aaKnown RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 CAPN6Q9Y6Q1 641 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms