RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SAYSD1Q9NPB0 183 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CLDN3O15551 220 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CRKP46108 304 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 GCLMP48507 274 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 RSBN1LQ6PCB5 846 aaPredicted RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 PITPNM3Q9BZ71 974 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 FGFR1OP2Q9NVK5 253 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ADAM21Q9UKJ8 722 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SRGAP2O75044 1071 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CDC27P30260 824 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ART3Q13508 389 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ARHGEF6Q15052 776 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 KNOP1Q1ED39 458 aaKnown RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 GUF1Q8N442 669 aaKnown RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SERPINI1Q99574 410 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ABCA8O94911 1581 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 MRPS25P82663 173 aaKnown RBP17.19■□□□□ 0.34
COL2A1-202ENST00000380518 KRT76Q01546 638 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 IL1RL1Q01638 556 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 CAV1Q03135 178 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF449Q6P9G9 518 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 ORC6Q9Y5N6 252 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 ADGRG1Q9Y653 693 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 MMEP08473 750 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 MMP10P09238 476 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 NCF2P19878 526 aaPredicted RBP17.19■□□□□ 0.34
COL2A1-202ENST00000380518 PDCLQ13371 301 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 CDO1Q16878 200 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 OR6B3Q8NGW1 331 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 MAML1Q92585 1016 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 FAF2Q96CS3 445 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 CEP95Q96GE4 821 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 BARHL2Q9NY43 387 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 PACSIN2Q9UNF0 486 aaPredicted RBP17.19■□□□□ 0.34
COL2A1-202ENST00000380518 DCTN3O75935 186 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 SLC4A1P02730 911 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 CACNB3P54284 484 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 PHEXP78562 749 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 NR1H3Q13133 447 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 TTLL6Q8N841 843 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
COL2A1-202ENST00000380518 ELAC2Q9BQ52 826 aaKnown RBP17.19■□□□□ 0.34
COL2A1-202ENST00000380518 FBXO40Q9UH90 709 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 FIS1Q9Y3D6 152 aa17.19■□□□□ 0.34
COL2A1-202ENST00000380518 TAF11Q15544 211 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 TERF2Q15554 542 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 MAPK6Q16659 721 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 SRRM1Q8IYB3 904 aaKnown RBP17.18■□□□□ 0.34
COL2A1-202ENST00000380518 HSPH1Q92598 858 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 MAP3K7O43318 606 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-202ENST00000380518 CALB1P05937 261 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 MARK3P27448 753 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 KLC3Q6P597 504 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 PODNQ7Z5L7 613 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 SCOCQ9UIL1 159 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 POTEB3A0JP26 581 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 POTECB2RU33 542 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-202ENST00000380518 PPP6R3Q5H9R7 873 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-202ENST00000380518 KRT39Q6A163 491 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 CRLF3Q8IUI8 442 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 WDR75Q8IWA0 830 aaKnown RBP17.18■□□□□ 0.34
COL2A1-202ENST00000380518 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 NMT2O60551 498 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 KRT38O76015 456 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 CCDC144BQ3MJ40 725 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 DSTYKQ6XUX3 929 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 FGD4Q96M96 766 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 STRIP2Q9ULQ0 834 aa17.18■□□□□ 0.34
COL2A1-202ENST00000380518 FRMD3A2A2Y4 597 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 COPEO14579 308 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 STXBP2Q15833 593 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF394Q53GI3 561 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 LRRC43Q8N309 656 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 PDLIM2Q96JY6 352 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 TRIM55Q9BYV6 548 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 DONSONQ9NYP3 566 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 FEM1BQ9UK73 627 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms