RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 COASYQ13057 564 aa26.19■■□□□ 1.78
U2AF1-202ENST00000380276 PRR16Q569H4 304 aa26.19■■□□□ 1.78
U2AF1-202ENST00000380276 REXO1Q8N1G1 1221 aaKnown RBP26.19■■□□□ 1.78
U2AF1-202ENST00000380276 COLGALT1Q8NBJ5 622 aa26.19■■□□□ 1.78
U2AF1-202ENST00000380276 CCDC12Q8WUD4 166 aaPredicted RBP26.19■■□□□ 1.78
U2AF1-202ENST00000380276 GABBR1Q9UBS5 961 aa26.19■■□□□ 1.78
U2AF1-202ENST00000380276 AKT3Q9Y243 479 aa26.19■■□□□ 1.78
U2AF1-202ENST00000380276 USP15Q9Y4E8 981 aaPredicted RBP26.19■■□□□ 1.78
U2AF1-202ENST00000380276 FNDC1Q4ZHG4 1894 aaPredicted RBP26.19■■□□□ 1.78
U2AF1-202ENST00000380276 ZBTB42B2RXF5 422 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 CYP3A4P08684 503 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 HMGB1P09429 215 aaKnown RBP26.18■■□□□ 1.78
U2AF1-202ENST00000380276 CPA1P15085 419 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 CLCN3P51790 818 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 ZNF746Q6NUN9 644 aaPredicted RBP26.18■■□□□ 1.78
U2AF1-202ENST00000380276 TMEM161AQ9NX61 479 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 CEP131Q9UPN4 1083 aa26.18■■□□□ 1.78
U2AF1-202ENST00000380276 ADAMTS3O15072 1205 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 LAG3P18627 525 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 RBM10P98175 930 aaKnown RBP26.17■■□□□ 1.78
U2AF1-202ENST00000380276 AKAP17AQ02040 695 aaKnown RBP26.17■■□□□ 1.78
U2AF1-202ENST00000380276 NHLH1Q02575 133 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 PLPP4Q5VZY2 271 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 MCTP2Q6DN12 878 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 Q6ZUG5 572 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 SMAP1Q8IYB5 467 aaPredicted RBP26.17■■□□□ 1.78
U2AF1-202ENST00000380276 EDAQ92838 391 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 RPGRIP1Q96KN7 1286 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 MAP7D2Q96T17 732 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 PCDHA10Q9Y5I2 948 aa26.17■■□□□ 1.78
U2AF1-202ENST00000380276 MAFBQ9Y5Q3 323 aaPredicted RBP26.17■■□□□ 1.78
U2AF1-202ENST00000380276 CDC45O75419 566 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 RCAN1P53805 252 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 ERVFC1P60507 584 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 TSGA10IPQ3SY00 556 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 FAM43BQ6ZT52 329 aaPredicted RBP26.16■■□□□ 1.78
U2AF1-202ENST00000380276 ABI1Q8IZP0 508 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 RNF169Q8NCN4 708 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 RASGRP4Q8TDF6 673 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 BRF1Q92994 677 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 ZNF668Q96K58 619 aaPredicted RBP26.16■■□□□ 1.78
U2AF1-202ENST00000380276 SCLT1Q96NL6 688 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 KCNH6Q9H252 994 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 ENTPD7Q9NQZ7 604 aa26.16■■□□□ 1.78
U2AF1-202ENST00000380276 MYH9P35579 1960 aaKnown RBP26.15■■□□□ 1.78
U2AF1-202ENST00000380276 ESYT2A0FGR8 921 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 GPR32O75388 356 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 SRGAP2BP0DMP2 458 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 ZSCAN20P17040 1043 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-202ENST00000380276 GNA11P29992 359 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 MRE11P49959 708 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 EFCAB12Q6NXP0 572 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 LRRC71Q8N4P6 559 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 JAKMIP1Q96N16 626 aaKnown RBP26.15■■□□□ 1.78
U2AF1-202ENST00000380276 ZMYND12Q9H0C1 365 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 PUF60Q9UHX1 559 aaKnown RBP26.15■■□□□ 1.78
U2AF1-202ENST00000380276 MUC6Q6W4X9 2439 aa26.15■■□□□ 1.78
U2AF1-202ENST00000380276 MAGEB2O15479 319 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 TMOD1P28289 359 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 NLRP11P59045 1033 aaKnown RBP26.14■■□□□ 1.78
U2AF1-202ENST00000380276 MAPK8IP2Q13387 824 aaPredicted RBP26.14■■□□□ 1.78
U2AF1-202ENST00000380276 DUSP6Q16828 381 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 CRYGNQ8WXF5 182 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 PHKBQ93100 1093 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 FAM167AQ96KS9 214 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 CDCA3Q99618 268 aaPredicted RBP26.14■■□□□ 1.78
U2AF1-202ENST00000380276 PHF7Q9BWX1 381 aaPredicted RBP26.14■■□□□ 1.78
U2AF1-202ENST00000380276 CWH43Q9H720 699 aa26.14■■□□□ 1.78
U2AF1-202ENST00000380276 C5orf42Q9H799 3197 aa26.14■■□□□ 1.77
U2AF1-202ENST00000380276 FSD2A1L4K1 749 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 TMEM221A6NGB7 291 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 LOC730098B7Z3J9 87 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 M0R296 226 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 PDE12Q6L8Q7 609 aaKnown RBP26.13■■□□□ 1.77
U2AF1-202ENST00000380276 LLGL2Q6P1M3 1020 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 TCF25Q9BQ70 676 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 APOL5Q9BWW9 433 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 TMEM117Q9H0C3 514 aa26.13■■□□□ 1.77
U2AF1-202ENST00000380276 ELAC1Q9H777 363 aaKnown RBP26.13■■□□□ 1.77
U2AF1-202ENST00000380276 WDR64B1ANS9 1081 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 HOXA2O43364 376 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 CHMP2AO43633 222 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 CA8P35219 290 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 TECP42680 631 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 DSC3Q14574 896 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 BLOC1S2Q6QNY1 142 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 TRIM67Q6ZTA4 783 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 VN1R2Q8NFZ6 395 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 BICD2Q8TD16 824 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 MRPS27Q92552 414 aaKnown RBP26.12■■□□□ 1.77
U2AF1-202ENST00000380276 PBXIP1Q96AQ6 731 aa26.12■■□□□ 1.77
U2AF1-202ENST00000380276 PRPF3O43395 683 aaKnown RBP26.11■■□□□ 1.77
U2AF1-202ENST00000380276 OATP04181 439 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 PBX3P40426 434 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 FAM189BP81408 668 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 PKN1Q16512 942 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 CENPQQ7L2Z9 268 aaPredicted RBP26.11■■□□□ 1.77
U2AF1-202ENST00000380276 SUGP1Q8IWZ8 645 aaKnown RBP26.11■■□□□ 1.77
U2AF1-202ENST00000380276 LRRC43Q8N309 656 aa26.11■■□□□ 1.77
U2AF1-202ENST00000380276 CCDC148Q8NFR7 591 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms