RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ARFGAP3Q9NP61 516 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 STRIP2Q9ULQ0 834 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SPTBN2O15020 2390 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 GPR75-ASB3A0A0A6YYF3 556 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CTDNEP1O95476 244 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 GAS8O95995 478 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 RFX5P48382 616 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 SPA17Q15506 151 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 KIZQ2M2Z5 673 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PPM1LQ5SGD2 360 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 DGKHQ86XP1 1220 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 KCNB2Q92953 911 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF274Q96GC6 653 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 NRXN3Q9Y4C0 1643 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 TMEM110-MUSTN1A8MSY1 372 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 FZD9O00144 591 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CETN3O15182 167 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CLDN3O15551 220 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 B3GAT3O94766 335 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CLCN6P51797 869 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 IL31Q6EBC2 164 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 NEDD1Q8NHV4 660 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 TBCKQ8TEA7 893 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 BRI3BPQ8WY22 251 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MRPS31Q92665 395 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MRFAP1L1Q96HT8 127 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 TTC25Q96NG3 672 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 INCENPQ9NQS7 918 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 NYAP2Q9P242 653 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PCDHAC2Q9Y5I4 1007 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 WTIPA6NIX2 430 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 KIF2AO00139 706 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 IPO5O00410 1097 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 EIF3JO75822 258 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 SKIP12755 728 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 ATP1A3P13637 1013 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 KRT10P13645 584 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 IFNAR2P48551 515 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PPP2R3AQ06190 1150 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 KARSQ15046 597 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PTPAQ15257 358 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 BRAPQ7Z569 592 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 FBXO18Q8NFZ0 1043 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 GDAP1L1Q96MZ0 367 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF558Q96NG5 402 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PCDHA10Q9Y5I2 948 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 GOLGA8CPA6NN73 597 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 NKRFO15226 690 aaKnown RBP eCLIP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 ACADMP11310 421 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 DSG3P32926 999 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PEX3P56589 373 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 PSMC6P62333 389 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MTFR1Q15390 333 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 UAP1L1Q3KQV9 507 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 DNAJC21Q5F1R6 531 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CACUL1Q86Y37 369 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 BBS5Q8N3I7 341 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 LINC00301Q8NCQ3 95 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MTRQ99707 1265 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MSTO1Q9BUK6 570 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 CYP4F11Q9HBI6 524 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 THG1LQ9NWX6 298 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 NDRG2Q9UN36 371 aaKnown RBP7.11□□□□□ -1.27
NEDD9-202ENST00000379446 MAPK8IP1Q9UQF2 711 aa7.11□□□□□ -1.27
NEDD9-202ENST00000379446 USP2O75604 605 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-202ENST00000379446 RHOXF2BP0C7M4 288 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 TCF7P36402 384 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-202ENST00000379446 TRAPPC10P48553 1259 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 EPHB1P54762 984 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 IQCB1Q15051 598 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 RILPL1Q5EBL4 403 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 HEATR6Q6AI08 1181 aaKnown RBP7.1□□□□□ -1.27
NEDD9-202ENST00000379446 ATG9AQ7Z3C6 839 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 UCMAQ8WVF2 138 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 GJA10Q969M2 543 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 RHOXF2Q9BQY4 288 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 MTMR4Q9NYA4 1195 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 EFCAB14O75071 495 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 IRF1P10914 325 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 POLR2BP30876 1174 aaKnown RBP7.1□□□□□ -1.27
NEDD9-202ENST00000379446 NLRP12P59046 1061 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 MYL5Q02045 173 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 C12orf60Q5U649 245 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 IQSEC1Q6DN90 963 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 EFCAB12Q6NXP0 572 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 SCARA5Q6ZMJ2 495 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 ADGRF4Q8IZF3 695 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 DNAJB3Q8WWF6 145 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 SKA1Q96BD8 255 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 SCLYQ96I15 445 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 TAAR1Q96RJ0 339 aa7.1□□□□□ -1.27
NEDD9-202ENST00000379446 MRPS23Q9Y3D9 190 aaKnown RBP7.1□□□□□ -1.27
NEDD9-202ENST00000379446 MORC2Q9Y6X9 1032 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms