RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 ESRRBO95718 433 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CHEK2O96017 543 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
LINC00654-201ENST00000379053 SLC15A2Q16348 729 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 PPP4R4Q6NUP7 873 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
LINC00654-201ENST00000379053 CDHR2Q9BYE9 1310 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 GSTA4O15217 222 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 BAG2O95816 211 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PAMP19021 973 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 LRRC63Q05C16 580 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 COG2Q14746 738 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TRIM67Q6ZTA4 783 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 FRA10AC1Q70Z53 315 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 STAP1Q9ULZ2 295 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 APOEP02649 317 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 FBXW4P57775 412 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 QRICH1Q2TAL8 776 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 ANGPTL8Q6UXH0 198 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 SZRD1Q7Z422 152 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 EDEM3Q9BZQ6 932 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 ADAM22Q9P0K1 906 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PIN4Q9Y237 131 aaKnown RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 NMT2O60551 498 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PLTPP55058 493 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PSMC5P62195 406 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 ADCY1Q08828 1119 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TCP11X2Q5H9J9 407 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 SFR1Q86XK3 245 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 ADORA2BP29275 332 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 YWHAHQ04917 246 aaPredicted RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TMEM270Q6UE05 265 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 TRIM42Q8IWZ5 723 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 LINC00301Q8NCQ3 95 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 MOCS3O95396 460 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 ATP1A2P50993 1020 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 NOP14P78316 857 aaKnown RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 IL9RQ01113 521 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 RBL2Q08999 1139 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 BRD3Q15059 726 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
LINC00654-201ENST00000379053 CRB1P82279 1406 aa11.72□□□□□ -0.53
LINC00654-201ENST00000379053 MAP3K4Q9Y6R4 1608 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 A0A087WWV3 80 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 A8MXQ7 604 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 M0QYV0 167 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 IPO5O00410 1097 aaKnown RBP11.71□□□□□ -0.53
LINC00654-201ENST00000379053 ENC1O14682 589 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 MT-ND3P03897 115 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 CETPP11597 493 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
LINC00654-201ENST00000379053 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 CREB3O43889 395 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 RALAP11233 206 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 CCL15-CCL14A0A0B4J2E2 113 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 FTCDO95954 541 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 HSPA6P17066 643 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.53
LINC00654-201ENST00000379053 GCLMP48507 274 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 TMED2Q15363 201 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 CCL15Q16663 113 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
LINC00654-201ENST00000379053 PAGE5Q96GU1 130 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 KATNAL1Q9BW62 490 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 TRPC7Q9HCX4 862 aa11.71□□□□□ -0.53
LINC00654-201ENST00000379053 TMEM247A6NEH6 219 aa11.71□□□□□ -0.54
LINC00654-201ENST00000379053 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.54
LINC00654-201ENST00000379053 SERPING1P05155 500 aa11.71□□□□□ -0.54
LINC00654-201ENST00000379053 CA4P22748 312 aa11.71□□□□□ -0.54
LINC00654-201ENST00000379053 MXD4Q14582 209 aaPredicted RBP11.71□□□□□ -0.54
LINC00654-201ENST00000379053 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.54
LINC00654-201ENST00000379053 SMIM5Q71RC9 77 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms