RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CCNB1P14635 433 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 NOVP48745 357 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 GSTO1P78417 241 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 SF3B3Q15393 1217 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TRADDQ15628 312 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 DPY19L2P1Q6NXN4 242 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 MIS18BP1Q6P0N0 1132 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 BICDL1Q6ZP65 573 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 CEP128Q6ZU80 1094 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF571Q7Z3V5 609 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 LRRC34Q8IZ02 419 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TBC1D16Q8TBP0 767 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TBCKQ8TEA7 893 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 STAMBPL1Q96FJ0 436 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ADAM7Q9H2U9 754 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TXLNGQ9NUQ3 528 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 AMACRQ9UHK6 382 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 PNMA2Q9UL42 364 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 PCDHA2Q9Y5H9 948 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ACTL7BQ9Y614 415 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 CYP2D7A0A087X1C5 515 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 A6NHS1 94 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 KLRF2D3W0D1 207 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 PDXKO00764 312 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ADAMTS3O15072 1205 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 LMNAP02545 664 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 CLTAP09496 248 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 RARAP10276 462 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 UCHL3P15374 230 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 VEGFAP15692 232 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ATP2A2P16615 1042 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 GCKP35557 465 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 STAT1P42224 750 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 MRPS35P82673 323 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ATP2B2Q01814 1243 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 MAPK7Q13164 816 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 LBRQ14739 615 aaKnown RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 EXOC3L4Q17RC7 722 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 SUSD4Q5VX71 490 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 AP1ARQ63HQ0 302 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ASRGL1Q7L266 308 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 APBB1IPQ7Z5R6 666 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF444Q8N0Y2 327 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF483Q8TF39 744 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 TMEM237Q96Q45 408 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ANKRD2Q9GZV1 360 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 EPB41L4BQ9H329 900 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 PRDM11Q9NQV5 511 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 IL17RBQ9NRM6 502 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ARMCX3Q9UH62 379 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-203ENST00000378778 ATP8A1Q9Y2Q0 1164 aa8.89□□□□□ -0.99
PTPRR-203ENST00000378778 NHSQ6T4R5 1651 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 KIAA0391O15091 583 aaKnown RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 CYTH3O43739 400 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 EYA4O95677 639 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 RXRBP28702 533 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 PPP4CP60510 307 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 MECOMQ03112 1051 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 PPATQ06203 517 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ADAM9Q13443 819 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 CNGA2Q16280 664 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 BMT2Q1RMZ1 405 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 C11orf63Q6NUN7 778 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SYDE1Q6ZW31 735 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 DAAM2Q86T65 1068 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 PNMA8AQ86V59 439 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 DDX42Q86XP3 938 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 AGGF1Q8N302 714 aaeCLIP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 AGAP11Q8TF27 550 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 TBC1D31Q96DN5 1066 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SELENOSQ9BQE4 189 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 PACSIN1Q9BY11 444 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ECT2Q9H8V3 914 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 HDAC9Q9UKV0 1011 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 RASGRF2O14827 1237 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 OPLAHO14841 1288 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 DDX3YO15523 660 aaKnown RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 NMT2O60551 498 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 NTSR2O95665 410 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 TSPY3P0CV98 308 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 TSPY8P0CW00 308 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ALAS1P13196 640 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 TXKP42681 527 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 CAV1Q03135 178 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 CYP1B1Q16678 543 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SGSM1Q2NKQ1 1148 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 MFN1Q8IWA4 741 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 LMNTD2Q8IXW0 634 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 UBL4BQ8N7F7 174 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SLC30A5Q8TAD4 765 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms