RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 SOX9P48436 509 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 MTMR1Q13613 665 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 DDR2Q16832 855 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 COBLL1Q53SF7 1204 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 KLHDC7AQ5VTJ3 777 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 C16orf46Q6P387 395 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CACNA2D3Q8IZS8 1091 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FAM169BQ8N8A8 192 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 TNFRSF25Q93038 417 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ERGIC2Q96RQ1 377 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CSRNP1Q96S65 589 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 RUFY1Q96T51 708 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ISCUQ9H1K1 167 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ANKIB1Q9P2G1 1089 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CTNNAL1Q9UBT7 734 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CTNND2Q9UQB3 1225 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 LUC7L2Q9Y383 392 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 LRRC42Q9Y546 428 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 MYH4Q9Y623 1939 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CPLX1O14810 134 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CIAO1O76071 339 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FXR2P51116 673 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 PPP2R2AP63151 447 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FOXO4P98177 505 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 SLC7A5Q01650 507 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 PPARAQ07869 468 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FUT2Q10981 343 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 PAK1Q13153 545 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 E2F5Q15329 346 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 TNFAIP8L3Q5GJ75 292 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FAM102BQ5T8I3 360 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ARHGAP27Q6ZUM4 889 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 SDCCAG8Q86SQ7 713 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 RNF180Q86T96 592 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 KIRREL3Q8IZU9 778 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ADSSL1Q8N142 457 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 GJD3Q8N144 294 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 RNF10Q8N5U6 811 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 AGAP11Q8TF27 550 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 MPP4Q96JB8 637 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 SCLT1Q96NL6 688 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 INPP4AQ96PE3 977 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 FAM129AQ9BZQ8 928 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 CAAP1Q9H8G2 361 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 NOP53Q9NZM5 478 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 PFDN2Q9UHV9 154 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 POLIQ9UNA4 740 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 PLAGL2Q9UPG8 496 aa7.28□□□□□ -1.24
CDKAL1-202ENST00000378610 ATP8B3O60423 1300 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 SPDYE3A6NKU9 549 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 BTBD11A6QL63 1104 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 PDE8AO60658 829 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 DDX58O95786 925 aaKnown RBP7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 PGRP06401 933 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 VIMP08670 466 aaKnown RBP7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 DNM2P50570 870 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 SEPT6Q14141 434 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 SETDB1Q15047 1291 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 CCDC92Q53HC0 331 aaPredicted RBP7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 C8orf74Q6P047 294 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 MAGEB6Q8N7X4 407 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 KHSRPQ92945 711 aaKnown RBP eCLIP7.27□□□□□ -1.247e-7■■■□□ 15.5
CDKAL1-202ENST00000378610 ALS2CR12Q96Q35 445 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 NUCKS1Q9H1E3 243 aaKnown RBP7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 ARHGEF3Q9NR81 526 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 TAB2Q9NYJ8 693 aa7.27□□□□□ -1.24
CDKAL1-202ENST00000378610 RGPD5Q99666 1765 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 VSTM5A8MXK1 200 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 BTBD18B2RXH4 712 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 E7ENQ6 273 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 LUC7L3O95232 432 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ATP4AP20648 1035 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 HSD17B3P37058 310 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 CCDC38Q502W7 563 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MIIPQ5JXC2 388 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 GKAP1Q5VSY0 366 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 LYPD8Q6UX82 237 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ENAHQ8N8S7 591 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 CAGE1Q8TC20 777 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 WASF1Q92558 559 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 THOC1Q96FV9 657 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MMTAG2Q9BU76 263 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 ADAM7Q9H2U9 754 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 CNOT10Q9H9A5 744 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 SALL4Q9UJQ4 1053 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 NFU1Q9UMS0 254 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 LAMB1P07942 1786 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 MYH3P11055 1940 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 FRMD3A2A2Y4 597 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 B4DLN1 442 aa7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 EIF1AYO14602 144 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 RNMTO43148 476 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-202ENST00000378610 BUB1BO60566 1050 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms