RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
RPGR-203ENST00000378505 ELOA2Q8IYF1 753 aaPredicted RBP12.15□□□□□ -0.46
RPGR-203ENST00000378505 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
RPGR-203ENST00000378505 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
RPGR-203ENST00000378505 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
RPGR-203ENST00000378505 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
RPGR-203ENST00000378505 ANAPC7Q9UJX3 599 aa12.15□□□□□ -0.46
RPGR-203ENST00000378505 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.47
RPGR-203ENST00000378505 MT-ND3P03897 115 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 SRGNP10124 158 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 FXR1P51114 621 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPGR-203ENST00000378505 DYNLT1P63172 113 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
RPGR-203ENST00000378505 GABPAQ06546 454 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 PDCLQ13371 301 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 TC2NQ8N9U0 490 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 TBK1Q9UHD2 729 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 AGLP35573 1532 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
RPGR-203ENST00000378505 ECE2O60344 883 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 ATP1A1P05023 1023 aaKnown RBP12.14□□□□□ -0.47
RPGR-203ENST00000378505 GGCXP38435 758 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 NUB1Q9Y5A7 615 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 STAT3P40763 770 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
RPGR-203ENST00000378505 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 TARSL2A2RTX5 802 aaKnown RBP12.14□□□□□ -0.47
RPGR-203ENST00000378505 PDXKO00764 312 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 RFX1P22670 979 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 EEPD1Q7L9B9 569 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 KCTD6Q8NC69 237 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 COG1Q8WTW3 980 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 AFG3L2Q9Y4W6 797 aa12.14□□□□□ -0.47
RPGR-203ENST00000378505 SYNJ2BP-COX16A0A087WUM0 186 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 NCK2O43639 380 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 CPP00450 1065 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 VAMP7P51809 220 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 OR6B2Q6IFH4 312 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 DARS2Q6PI48 645 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 RPS6KC1Q96S38 1066 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPGR-203ENST00000378505 DDX23Q9BUQ8 820 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 COX16Q9P0S2 106 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 HERC5Q9UII4 1024 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 ACSL3O95573 720 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 EYA4O95677 639 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 OSBPP22059 807 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 SFNP31947 248 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 ARL4AP40617 200 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 CENPUQ71F23 418 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 ATP6V0A4Q9HBG4 840 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 PDS5AQ29RF7 1337 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 SSU72P8A0A1W2PR75 194 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 SLC16A4O15374 487 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 PRPSAP2O60256 369 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 NTSR2O95665 410 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 CA4P22748 312 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 OSTNP61366 133 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 STK4Q13043 487 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 SNX12Q9UMY4 172 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 TJP3O95049 919 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 RXRBP28702 533 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 MYO1EQ12965 1108 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
RPGR-203ENST00000378505 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
RPGR-203ENST00000378505 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 CLDN3O15551 220 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 VSNL1P62760 191 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 EPHA7Q15375 998 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 NXNQ6DKJ4 435 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms