RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 FAM186BQ8IYM0 893 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 PIK3R5Q8WYR1 880 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 SUCLA2Q9P2R7 463 aaPredicted RBP19.83■□□□□ 0.77
TDP2-202ENST00000378198 SEL1LQ9UBV2 794 aa19.83■□□□□ 0.77
TDP2-202ENST00000378198 SLITRK3O94933 977 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 ZBTB48P10074 688 aaPredicted RBP19.83■□□□□ 0.76
TDP2-202ENST00000378198 HSPA9P38646 679 aaKnown RBP19.83■□□□□ 0.76
TDP2-202ENST00000378198 GUCY2FP51841 1108 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 CUL1Q13616 776 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 PEX26Q7Z412 305 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.83■□□□□ 0.763e-7■■□□□ 14.4
TDP2-202ENST00000378198 BCAS3Q9H6U6 928 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 STXBP5LQ9Y2K9 1186 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 ZMYM2Q9UBW7 1377 aa19.83■□□□□ 0.76
TDP2-202ENST00000378198 COL2A1P02458 1487 aaPredicted RBP19.83■□□□□ 0.76
TDP2-202ENST00000378198 SHTN1A0MZ66 631 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 ZNF233A6NK53 670 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 SFI1A8K8P3 1242 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 TMCO5BA8MYB1 307 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 DDX3XO00571 662 aaKnown RBP eCLIP19.82■□□□□ 0.765e-8■■□□□ 11.6
TDP2-202ENST00000378198 PSMD10O75832 226 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 KRT14P02533 472 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 PPP2R5CQ13362 524 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 LRCH2Q5VUJ6 765 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 STXBP4Q6ZWJ1 553 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 METTL13Q8N6R0 699 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 BCAS4Q8TDM0 211 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 PIGOQ8TEQ8 1089 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 DYDC2Q96IM9 177 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 PARVGQ9HBI0 331 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 POLD4Q9HCU8 107 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 TAL1P17542 331 aaPredicted RBP19.82■□□□□ 0.76
TDP2-202ENST00000378198 NMT1P30419 496 aaKnown RBP19.82■□□□□ 0.76
TDP2-202ENST00000378198 JAG1P78504 1218 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 EMC10Q5UCC4 262 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 GJB7Q6PEY0 223 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 KDM7AQ6ZMT4 941 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 RASGEF1CQ8N431 466 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 SLC5A5Q92911 643 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.76
TDP2-202ENST00000378198 WDR18Q9BV38 432 aa19.82■□□□□ 0.76
TDP2-202ENST00000378198 A0A1W2PRG0 241 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 BHMG1C9JSJ3 638 aaPredicted RBP19.81■□□□□ 0.76
TDP2-202ENST00000378198 EBAG9O00559 213 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 LMNB1P20700 586 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 SOX5P35711 763 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 STAT2P52630 851 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
TDP2-202ENST00000378198 FMNL3Q8IVF7 1028 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 SLC30A5Q8TAD4 765 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 U2AF1L4Q8WU68 220 aaKnown RBP19.81■□□□□ 0.76
TDP2-202ENST00000378198 STK33Q9BYT3 514 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 GOLPH3Q9H4A6 298 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 TDRD3Q9H7E2 651 aaKnown RBP19.81■□□□□ 0.76
TDP2-202ENST00000378198 NOC2LQ9Y3T9 749 aaKnown RBP19.81■□□□□ 0.76
TDP2-202ENST00000378198 DAAM1Q9Y4D1 1078 aa19.81■□□□□ 0.76
TDP2-202ENST00000378198 CCT5P48643 541 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 FMO5P49326 533 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 PRELPP51888 382 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ERVK-9P63128 1117 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 EHMT1Q9H9B1 1298 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 KCND2Q9NZV8 630 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 FRMPD4Q14CM0 1322 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 EVI5O60447 810 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 CFBP00751 764 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 CCDC172P0C7W6 258 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ZNF131P52739 623 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 HLTFQ14527 1009 aaKnown RBP eCLIP19.8■□□□□ 0.76
TDP2-202ENST00000378198 TRADDQ15628 312 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ZC2HC1CQ53FD0 456 aaPredicted RBP19.8■□□□□ 0.76
TDP2-202ENST00000378198 LRIG3Q6UXM1 1119 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ZNF720Q7Z2F6 126 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 DAAM2Q86T65 1068 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 NT5DC3Q86UY8 548 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 DNAAF5Q86Y56 855 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 NACC1Q96RE7 527 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ARHGEF10LQ9HCE6 1279 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 ODF2LQ9ULJ1 636 aa19.8■□□□□ 0.76
TDP2-202ENST00000378198 HMGB1P1B2RPK0 211 aaPredicted RBP19.79■□□□□ 0.76
TDP2-202ENST00000378198 F8VZ95 297 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 GCOM1H8Y6P7 765 aaPredicted RBP19.79■□□□□ 0.76
TDP2-202ENST00000378198 SART1O43290 800 aaKnown RBP19.79■□□□□ 0.76
TDP2-202ENST00000378198 POLR2MP0CAP2 368 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 GALCP54803 685 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 PPP2R5AQ15172 486 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 KCTD16Q68DU8 428 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 EFCAB13Q8IY85 973 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 LNX1Q8TBB1 728 aaPredicted RBP19.79■□□□□ 0.76
TDP2-202ENST00000378198 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 HES6Q96HZ4 224 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 SLITRK6Q9H5Y7 841 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 DMAC2Q9NW81 257 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 DNAJC12Q9UKB3 198 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 AMFRQ9UKV5 643 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 FRMD4BQ9Y2L6 1034 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 NCANO14594 1321 aa19.79■□□□□ 0.76
TDP2-202ENST00000378198 KRIT1O00522 736 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms