RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 TBC1D10CQ8IV04 446 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 LRRC53A6NM62 1247 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 NLRP14Q86W24 1093 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 GLYCTKQ8IVS8 523 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 DYDC2Q96IM9 177 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 ART3Q13508 389 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 GPATCH4Q5T3I0 446 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 MMP19Q99542 508 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 MRPL47Q9HD33 250 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 DRC3Q9H069 523 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SNX25Q9H3E2 840 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 PRCPP42785 496 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 MECOMQ03112 1051 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SEPT2Q15019 361 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 GLE1Q53GS7 698 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 PITPNM3Q9BZ71 974 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 CDK12Q9NYV4 1490 aaPredicted RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SEMA3EO15041 775 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 DCTN3O75935 186 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 GCFC2P16383 781 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 TFDP1Q14186 410 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 DNAAF3Q8N9W5 541 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 PARVGQ9HBI0 331 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 HSPA6P17066 643 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 MAGOHP61326 146 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 FMR1NBQ8N0W7 255 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 A0A0G2JND7 137 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 F5H423 210 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 CHUKO15111 745 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 PYROXD1Q8WU10 500 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 CEP72Q9P209 647 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 KITP10721 976 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 URGCPQ8TCY9 931 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 HACD3Q9P035 362 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 PACSIN2Q9UNF0 486 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 IQANK1A0A1B0GTG1 560 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 MED7O43513 233 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 NUMBP49757 651 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 METP08581 1390 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 EEF1B2P24534 225 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 RWDD2BP57060 319 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 CENPUQ71F23 418 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 PDCD6IPQ8WUM4 868 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 ANGPTL3Q9Y5C1 460 aa12.84□□□□□ -0.35
PCDHA9-201ENST00000378122 SPAG7O75391 227 aa12.83□□□□□ -0.35
PCDHA9-201ENST00000378122 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.35
PCDHA9-201ENST00000378122 PDCD2Q16342 344 aaPredicted RBP12.83□□□□□ -0.35
PCDHA9-201ENST00000378122 MFSD1Q9H3U5 465 aa12.83□□□□□ -0.35
PCDHA9-201ENST00000378122 LGALS16A8MUM7 142 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 PFDN6O15212 129 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CA4P22748 312 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 EEF1DP29692 281 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 MCAMP43121 646 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 OR6B2Q6IFH4 312 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 MLXIPLQ9NP71 852 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 ZFP69BQ9UJL9 534 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 GMNCA6NCL1 334 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 PMS2P54278 862 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 TTC17Q96AE7 1141 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 SAAL1Q96ER3 474 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms