RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 ADCK2Q7Z695 626 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 EXD1Q8NHP7 514 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ADA2Q9NZK5 511 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 VPS54Q9P1Q0 977 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 SBNO1A3KN83 1393 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 TMEM191CA6NGB0 347 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 TMEM232C9JQI7 657 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 SORBS3O60504 671 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 HIST1H2AGP0C0S8 130 aaPredicted RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 HIST1H2ADP20671 130 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 EIF3BP55884 814 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 ABCE1P61221 599 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 DCUN1D1Q96GG9 259 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 HIST1H2AHQ96KK5 128 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 HIST1H2AJQ99878 128 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 H2AFJQ9BTM1 129 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 SYBUQ9NX95 663 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
RTN3-206ENST00000377819 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
RTN3-206ENST00000377819 A0A087WUV0 522 aaPredicted RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 CHGBP05060 677 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 GAP43P17677 238 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 PHKG1Q16816 387 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 CENPPQ6IPU0 288 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 SCN4BQ8IWT1 228 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 FLAD1Q8NFF5 587 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 MYRIPQ8NFW9 859 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 SAAL1Q96ER3 474 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 DYDC2Q96IM9 177 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 SPON2Q9BUD6 331 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 NCOA5Q9HCD5 579 aaKnown RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 LZTS1Q9Y250 596 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 KRT75O95678 551 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 DPYDQ12882 1025 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 SLFN12LQ6IEE8 588 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 AMNQ9BXJ7 453 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 DTNAQ9Y4J8 743 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 RANBP1P43487 201 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 TSPY1Q01534 308 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 GUCY1A3Q02108 690 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 SPARCL1Q14515 664 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 VEPH1Q14D04 833 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 HEXIM2Q96MH2 286 aaKnown RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 TMEM206Q9H813 350 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 BFARQ9NZS9 450 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 UVRAGQ9P2Y5 699 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 AFF4Q9UHB7 1163 aaKnown RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 IKBKBO14920 756 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 ATP5HO75947 161 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 CHMLP26374 656 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 CENPAP49450 140 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 HPCAP84074 193 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 GTF2H3Q13889 308 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 NUGGCQ68CJ6 796 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 KRT39Q6A163 491 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 PLD3Q8IV08 490 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 OR6P1Q8NGX9 317 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 CCDC17Q96LX7 622 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 NSMCE4AQ9NXX6 385 aa11.34□□□□□ -0.59
RTN3-206ENST00000377819 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
RTN3-206ENST00000377819 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 KRT14P02533 472 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 SEPT2Q15019 361 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 SLFN13Q68D06 897 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 C19orf60Q96EN9 201 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 PITPNM3Q9BZ71 974 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 VPS11Q9H270 941 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 PKD2L2Q9NZM6 624 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 STON1Q9Y6Q2 735 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 KIAA1210Q9ULL0 1709 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 SERPIND1P05546 499 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 ST13P50502 369 aaKnown RBP11.33□□□□□ -0.6
RTN3-206ENST00000377819 KRT17Q04695 432 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 AP1B1Q10567 949 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 CATSPER4Q7RTX7 472 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
RTN3-206ENST00000377819 FAM161BQ96MY7 647 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 A0A0G2JND7 137 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 KLRF2D3W0D1 207 aa11.33□□□□□ -0.6
RTN3-206ENST00000377819 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms