RNA–Protein interactions for RNA: ENST00000377060.7

CNNM3-202, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 2 BASIC

Gene CNNM3, Length 3,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-202ENST00000377060 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
CNNM3-202ENST00000377060 NUCKS1Q9H1E3 243 aaKnown RBP20.3■□□□□ 0.84
CNNM3-202ENST00000377060 TDRD3Q9H7E2 651 aaKnown RBP20.3■□□□□ 0.84
CNNM3-202ENST00000377060 SUFUQ9UMX1 484 aa20.3■□□□□ 0.84
CNNM3-202ENST00000377060 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.3■□□□□ 0.84
CNNM3-202ENST00000377060 UTP11Q9Y3A2 253 aaKnown RBP20.3■□□□□ 0.84
CNNM3-202ENST00000377060 CLRN2A0PK11 232 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 TRIP13Q15645 432 aaPredicted RBP20.29■□□□□ 0.84
CNNM3-202ENST00000377060 CCDC121Q6ZUS5 278 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 CPNE8Q86YQ8 564 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 TBC1D22AQ8WUA7 517 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 EIF2AK1Q9BQI3 630 aaKnown RBP20.29■□□□□ 0.84
CNNM3-202ENST00000377060 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 EIF4E1BA6NMX2 242 aaKnown RBP20.29■□□□□ 0.84
CNNM3-202ENST00000377060 SSTR3P32745 418 aaPredicted RBP20.29■□□□□ 0.84
CNNM3-202ENST00000377060 KCNJ1P48048 391 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 SLC12A3P55017 1021 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 PTGISQ16647 500 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 MYCBPAPQ8TBZ2 947 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 ARHGEF26Q96DR7 871 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 FOXO6A8MYZ6 492 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
CNNM3-202ENST00000377060 HOXD13P35453 343 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 QPCTQ16769 361 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 C2CD6Q53TS8 623 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 B4GALNT4Q76KP1 1039 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 CAVIN3Q969G5 261 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 CCDC127Q96BQ5 260 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 THAP2Q9H0W7 228 aa20.29■□□□□ 0.84
CNNM3-202ENST00000377060 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 TMEM150BA6NC51 233 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 LCA5LO95447 670 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 USP11P51784 963 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 SNX1Q13596 522 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 IQCDQ96DY2 449 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 MSH4O15457 936 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
CNNM3-202ENST00000377060 SHOX2O60902 331 aaPredicted RBP20.28■□□□□ 0.84
CNNM3-202ENST00000377060 UAP1Q16222 522 aaPredicted RBP20.28■□□□□ 0.84
CNNM3-202ENST00000377060 UBAP2Q5T6F2 1119 aaKnown RBP20.28■□□□□ 0.84
CNNM3-202ENST00000377060 FAM178BQ8IXR5 827 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 FAM118BQ9BPY3 351 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 CNOT8Q9UFF9 292 aaKnown RBP20.28■□□□□ 0.84
CNNM3-202ENST00000377060 PCDHGC5Q9Y5F6 944 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
CNNM3-202ENST00000377060 TCP10L2B9ZVM9 353 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 MEIS2O14770 477 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 RPL13P26373 211 aaKnown RBP20.27■□□□□ 0.84
CNNM3-202ENST00000377060 ECE1P42892 770 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 CBWD6Q4V339 395 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 CBWD3Q5JTY5 395 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 CBWD5Q5RIA9 395 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 SLC20A1Q8WUM9 679 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.844e-9■□□□□ 11.3
CNNM3-202ENST00000377060 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 EPN3Q9H201 632 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 CD2APQ9Y5K6 639 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 GCLMP48507 274 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 MARCKSL1P49006 195 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 WHAMMQ8TF30 809 aa20.27■□□□□ 0.84
CNNM3-202ENST00000377060 MRRFQ96E11 262 aaKnown RBP20.27■□□□□ 0.84
CNNM3-202ENST00000377060 SHBGP04278 402 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 GYS1P13807 737 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 ZNF844Q08AG5 666 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 LRRC14Q15048 493 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 GLE1Q53GS7 698 aaKnown RBP20.27■□□□□ 0.83
CNNM3-202ENST00000377060 LRCH2Q5VUJ6 765 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 HS2ST1Q7LGA3 356 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 CPXCR1Q8N123 301 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 SLC35C1Q96A29 364 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 ADAM33Q9BZ11 813 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 UBE2TQ9NPD8 197 aaPredicted RBP20.27■□□□□ 0.83
CNNM3-202ENST00000377060 PCDHA2Q9Y5H9 948 aa20.27■□□□□ 0.83
CNNM3-202ENST00000377060 SKAP2O75563 359 aaPredicted RBP20.26■□□□□ 0.83
CNNM3-202ENST00000377060 FGFR4P22455 802 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 SSR1P43307 286 aaKnown RBP20.26■□□□□ 0.83
CNNM3-202ENST00000377060 CDR1P51861 262 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 IFI16Q16666 785 aaKnown RBP20.26■□□□□ 0.83
CNNM3-202ENST00000377060 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 AIPL1Q9NZN9 384 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
CNNM3-202ENST00000377060 NDUFB10O96000 172 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 VIMP08670 466 aaKnown RBP20.26■□□□□ 0.83
CNNM3-202ENST00000377060 CRKP46108 304 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 MIGA2Q7L4E1 593 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 CCDC26Q8TAB7 109 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 KAT5Q92993 513 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 LRRC45Q96CN5 670 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 ERVK-5Q9HDB9 667 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 A0A1B0GUL6 1792 aa20.26■□□□□ 0.83
CNNM3-202ENST00000377060 CTNND1O60716 968 aaKnown RBP20.25■□□□□ 0.83
CNNM3-202ENST00000377060 GCFC2P16383 781 aaKnown RBP20.25■□□□□ 0.83
CNNM3-202ENST00000377060 EPC2Q52LR7 807 aa20.25■□□□□ 0.83
CNNM3-202ENST00000377060 FRMD4BQ9Y2L6 1034 aa20.25■□□□□ 0.83
CNNM3-202ENST00000377060 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
CNNM3-202ENST00000377060 ROBO3Q96MS0 1386 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms