RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 BORCS6Q96GS4 357 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 PAGR1Q9BTK6 254 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 SLC12A6Q9UHW9 1150 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 ZMYM2Q9UBW7 1377 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 A0A0A6YYK5 440 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 CCDC188H7C350 402 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 BUB1BO60566 1050 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 RPL13P26373 211 aaKnown RBP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 TMOD1P28289 359 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 NMT1P30419 496 aaKnown RBP14.4□□□□□ -0.1
ACTN1-202ENST00000376839 VPS36Q86VN1 386 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 HES6Q96HZ4 224 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 DPH5Q9H2P9 285 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 SUGT1Q9Y2Z0 365 aa14.4□□□□□ -0.1
ACTN1-202ENST00000376839 GOLGB1Q14789 3259 aaKnown RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 DCDC2CA8MYV0 355 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 TBX3O15119 743 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 FAM107AO95990 144 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 SREBF1P36956 1147 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 COG2Q14746 738 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 ZC2HC1CQ53FD0 456 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 SUGP1Q8IWZ8 645 aaKnown RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 CRAMP1Q96RY5 1269 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 EIF2AK1Q9BQI3 630 aaKnown RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 TRIM51Q9BSJ1 452 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 CNOT8Q9UFF9 292 aaKnown RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-202ENST00000376839 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 ANXA13P27216 316 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 DCAF12L1Q5VU92 463 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 TMC3Q7Z5M5 1100 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 CNPY4Q8N129 248 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 SLC30A5Q8TAD4 765 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 LMBR1Q8WVP7 490 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 MKL1Q969V6 931 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 AMNQ9BXJ7 453 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 TRIM31Q9BZY9 425 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 PPP1R9AQ9ULJ8 1098 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 QSER1Q2KHR3 1735 aa14.39□□□□□ -0.11
ACTN1-202ENST00000376839 F8VZ95 297 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 OPLAHO14841 1288 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 BACH1O14867 736 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 ZBTB39O15060 712 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 FGGP02679 453 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 FERP16591 822 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 ABCB4P21439 1286 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 COPB2P35606 906 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 STAT1P42224 750 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 CERKLQ49MI3 558 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 RINT1Q6NUQ1 792 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 TEKT1Q969V4 418 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 SLITRK6Q9H5Y7 841 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 ATP8B3O60423 1300 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 EYA4O95677 639 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 IFT88Q13099 833 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 RNF187Q5TA31 235 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 ADAT2Q7Z6V5 191 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 SPATS2Q86XZ4 545 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 SYCE1Q8N0S2 351 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 SLC35G2Q8TBE7 412 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 CYFIP2Q96F07 1278 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 FAM20AQ96MK3 541 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 ZC3H12CQ9C0D7 883 aaKnown RBP14.38□□□□□ -0.11
ACTN1-202ENST00000376839 NYAP2Q9P242 653 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
ACTN1-202ENST00000376839 GTPBP10A4D1E9 387 aaKnown RBP14.37□□□□□ -0.11
ACTN1-202ENST00000376839 F5H6K3 240 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 FSBPO95073 299 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 ADRA2BP18089 450 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 SOX5P35711 763 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 KLRC3Q07444 240 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
ACTN1-202ENST00000376839 IKQ13123 557 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-202ENST00000376839 DRAP1Q14919 205 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-202ENST00000376839 CBWD6Q4V339 395 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 CBWD3Q5JTY5 395 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 CBWD5Q5RIA9 395 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 SP8Q8IXZ3 490 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 ARFGAP2Q8N6H7 521 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 ATP8B4Q8TF62 1192 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 SEC14L1Q92503 715 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 ARHGEF26Q96DR7 871 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 GPR88Q9GZN0 384 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 AMFRQ9UKV5 643 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
ACTN1-202ENST00000376839 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
ACTN1-202ENST00000376839 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms