RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MAP7D2Q96T17 732 aa23.76■■□□□ 1.39
VSX1-201ENST00000376707 EPHX3Q9H6B9 360 aa23.76■■□□□ 1.39
VSX1-201ENST00000376707 RGS18Q9NS28 235 aa23.76■■□□□ 1.39
VSX1-201ENST00000376707 PDRG1Q9NUG6 133 aa23.76■■□□□ 1.39
VSX1-201ENST00000376707 AKT3Q9Y243 479 aa23.76■■□□□ 1.39
VSX1-201ENST00000376707 ZNF862O60290 1169 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 GPR32O75388 356 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 TMOD1P28289 359 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 PRKCEQ02156 737 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 EFCAB12Q6NXP0 572 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 FAM228AQ86W67 206 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 BLIDQ8IZY5 108 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 UNC45AQ9H3U1 944 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 FAM50BQ9Y247 325 aa23.75■■□□□ 1.39
VSX1-201ENST00000376707 HYAL1Q12794 435 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 Q4G0T1 1027 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 GJD3Q8N144 294 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 KLHL23Q8NBE8 558 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 GJA10Q969M2 543 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 CD320Q9NPF0 282 aa23.74■■□□□ 1.39
VSX1-201ENST00000376707 C9IYK1 514 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 TDP2O95551 362 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 ITGB1P05556 798 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 SSTR3P32745 418 aaPredicted RBP23.73■■□□□ 1.39
VSX1-201ENST00000376707 NLRP11P59045 1033 aaKnown RBP23.73■■□□□ 1.39
VSX1-201ENST00000376707 UGCGQ16739 394 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 SPOUT1Q5T280 376 aaKnown RBP23.73■■□□□ 1.39
VSX1-201ENST00000376707 GALNT17Q6IS24 598 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 FAM177A1Q8N128 213 aaPredicted RBP23.73■■□□□ 1.39
VSX1-201ENST00000376707 LRRC71Q8N4P6 559 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 DAGLBQ8NCG7 672 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 PPP2R3CQ969Q6 453 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 IGFLR1Q9H665 355 aa23.73■■□□□ 1.39
VSX1-201ENST00000376707 TBKBP1A7MCY6 615 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 ANAPC15P60006 121 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 CAMK1Q14012 370 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 MIER3Q7Z3K6 550 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 ZNF710Q8N1W2 664 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 RDM1Q8NG50 284 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 SPPL3Q8TCT6 385 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 KHSRPQ92945 711 aaKnown RBP eCLIP23.72■■□□□ 1.39
VSX1-201ENST00000376707 AIFM3Q96NN9 605 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 ATP6V0A4Q9HBG4 840 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 LOXHD1Q8IVV2 1947 aa23.72■■□□□ 1.39
VSX1-201ENST00000376707 CYP3A7-CYP3A51PA0A087WV96 503 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 PSMD10O75832 226 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 CDKL5O76039 1030 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 CYP3A7P24462 503 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 DNAJB1P25685 340 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 TBC1D8BQ0IIM8 1120 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 NONOQ15233 471 aaKnown RBP eCLIP23.71■■□□□ 1.39
VSX1-201ENST00000376707 CTC1Q2NKJ3 1217 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 FAM102BQ5T8I3 360 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 LINC01465Q8N7H1 131 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 POF1BQ8WVV4 589 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 SCLT1Q96NL6 688 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 AAASQ9NRG9 546 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 TMEM161AQ9NX61 479 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 RAPGEFL1Q9UHV5 662 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 PCDHB12Q9Y5F1 795 aa23.71■■□□□ 1.39
VSX1-201ENST00000376707 M0R2N6 131 aa23.7■■□□□ 1.38
VSX1-201ENST00000376707 LTBRP36941 435 aa23.7■■□□□ 1.38
VSX1-201ENST00000376707 MOXD1Q6UVY6 613 aa23.7■■□□□ 1.38
VSX1-201ENST00000376707 KRT25Q7Z3Z0 450 aa23.7■■□□□ 1.38
VSX1-201ENST00000376707 ADAMTS10Q9H324 1103 aa23.7■■□□□ 1.38
VSX1-201ENST00000376707 MYH9P35579 1960 aaKnown RBP23.7■■□□□ 1.38
VSX1-201ENST00000376707 FGFR1P11362 822 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 ZSCAN20P17040 1043 aaPredicted RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 EIF4BP23588 611 aaKnown RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 GTF2F1P35269 517 aaKnown RBP eCLIP23.69■■□□□ 1.38
VSX1-201ENST00000376707 FAM189BP81408 668 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 DSC3Q14574 896 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 NPY5RQ15761 445 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 CLUL1Q15846 466 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 TMEM31Q5JXX7 168 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 ZNF668Q96K58 619 aaPredicted RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 ELAC1Q9H777 363 aaKnown RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 SEPT9Q9UHD8 586 aaPredicted RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 DDX25Q9UHL0 483 aaKnown RBP23.69■■□□□ 1.38
VSX1-201ENST00000376707 KCNJ14Q9UNX9 436 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 EVPLQ92817 2033 aa23.69■■□□□ 1.38
VSX1-201ENST00000376707 PI4K2BG5E9Z4 385 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 XBP1P17861 261 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 IRS1P35568 1242 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 GPC3P51654 580 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 DLX2Q07687 328 aaPredicted RBP23.68■■□□□ 1.38
VSX1-201ENST00000376707 SCRN1Q12765 414 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 INF2Q27J81 1249 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 XKR3Q5GH77 459 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 ETNPPLQ8TBG4 499 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 MBOAT7Q96N66 472 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 PRKAG3Q9UGI9 489 aa23.68■■□□□ 1.38
VSX1-201ENST00000376707 CCDC194A0A1B0GVG4 234 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 LINC01565O15544 149 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 NDUFV1P49821 464 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 TARBP2Q15633 366 aaKnown RBP23.67■■□□□ 1.38
VSX1-201ENST00000376707 LETM2Q2VYF4 491 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 MTERF2Q49AM1 385 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 B3GNT9Q6UX72 402 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms