RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SMAD2Q15796 467 aaKnown RBP16.66■□□□□ 0.26
HDAC6-204ENST00000376643 KIZQ2M2Z5 673 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 ABI1Q8IZP0 508 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 KLHL23Q8NBE8 558 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 SPPL3Q8TCT6 385 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-204ENST00000376643 OSMRQ99650 979 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 ALG13Q9NP73 1137 aaKnown RBP16.66■□□□□ 0.26
HDAC6-204ENST00000376643 DISC1Q9NRI5 854 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
HDAC6-204ENST00000376643 AKT3Q9Y243 479 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
HDAC6-204ENST00000376643 TBKBP1A7MCY6 615 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 ZBTB42B2RXF5 422 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 C9IYK1 514 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 CDKL5O76039 1030 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 DEXIO95424 95 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 OATP04181 439 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 PDIA3P30101 505 aaKnown RBP16.65■□□□□ 0.26
HDAC6-204ENST00000376643 PPM1AP35813 382 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 ZP2Q05996 745 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 NTRK3Q16288 839 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 LRCH2Q5VUJ6 765 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 MOXD1Q6UVY6 613 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 EFHBQ8N7U6 833 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 POF1BQ8WVV4 589 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-204ENST00000376643 SCLT1Q96NL6 688 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
HDAC6-204ENST00000376643 XBP1P17861 261 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 ATP4AP20648 1035 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 DNM2P50570 870 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 ADAM15Q13444 863 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 EFCAB12Q6NXP0 572 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 THNSL1Q8IYQ7 743 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 MICAL1Q8TDZ2 1067 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 JPH2Q9BR39 696 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-204ENST00000376643 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 IGFLR1Q9H665 355 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 TLR9Q9NR96 1032 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 DACT1Q9NYF0 836 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 PCDHA4Q9UN74 947 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
HDAC6-204ENST00000376643 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 MSH4O15457 936 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 MBTPS2O43462 519 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 DKC1O60832 514 aaKnown RBP eCLIP16.63■□□□□ 0.25
HDAC6-204ENST00000376643 GPR32O75388 356 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 VTNP04004 478 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 EIF4BP23588 611 aaKnown RBP16.63■□□□□ 0.25
HDAC6-204ENST00000376643 LTBRP36941 435 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
HDAC6-204ENST00000376643 FAM189BP81408 668 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 PRKCEQ02156 737 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 BMS1Q14692 1282 aaKnown RBP16.63■□□□□ 0.25
HDAC6-204ENST00000376643 Q4G0T1 1027 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 LRRC43Q8N309 656 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 RASGRP4Q8TDF6 673 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 TMEM40Q8WWA1 233 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 SLC5A5Q92911 643 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 LENG9Q96B70 501 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 NAP1L4Q99733 375 aaKnown RBP16.63■□□□□ 0.25
HDAC6-204ENST00000376643 CD320Q9NPF0 282 aa16.63■□□□□ 0.25
HDAC6-204ENST00000376643 MYH9P35579 1960 aaKnown RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 EYA4O95677 639 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 CLCN3P51790 818 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 NLRP11P59045 1033 aaKnown RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 KRT17Q04695 432 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 COASYQ13057 564 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 EXOC8Q8IYI6 725 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 MRPL9Q9BYD2 267 aaKnown RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 INO80BQ9C086 356 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-204ENST00000376643 TLE6Q9H808 572 aa16.62■□□□□ 0.25
HDAC6-204ENST00000376643 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 CHMP2AO43633 222 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 MGEA5O60502 916 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
HDAC6-204ENST00000376643 TBX10O75333 385 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 FGF18O76093 207 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 CSPG5O95196 566 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 SKIP12755 728 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 CYP3A7P24462 503 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 PLCB3Q01970 1234 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 CAMK1Q14012 370 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 DSC3Q14574 896 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 NONOQ15233 471 aaKnown RBP eCLIP16.61■□□□□ 0.25
HDAC6-204ENST00000376643 XKR3Q5GH77 459 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 KRT25Q7Z3Z0 450 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms