RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 POTEEQ6S8J3 1075 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 SEC16BQ96JE7 1060 aa15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-202ENST00000375692 GOLGA6L7A0A1B0GV03 622 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 BHMG1C9JSJ3 638 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 MEIS1O00470 390 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 SLURP2P0DP57 97 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 AKR1B1P15121 316 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 HOXD13P35453 343 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 COPB2P35606 906 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 PSMC6P62333 389 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 BYSLQ13895 437 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 ADAT2Q7Z6V5 191 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 DAAM2Q86T65 1068 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 TRIM51Q9BSJ1 452 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 CLK2P49760 499 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 KRT71Q3SY84 523 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 TMC3Q7Z5M5 1100 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 EIF1ADQ8N9N8 165 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 PSMD1Q99460 953 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 CXorf56Q9H5V9 222 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
CLCNKA-202ENST00000375692 USP17L10C9JJH3 530 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 hCG_1984214I3L0E3 225 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 AFPP02771 609 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 NOVP48745 357 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 CASP4P49662 377 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 BIRC3Q13489 604 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 C10orf76Q5T2E6 689 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 ZNF713Q8N859 430 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 U2AF1L4Q8WU68 220 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 CALR3Q96L12 384 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 STXBP5LQ9Y2K9 1186 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 DDX3XO00571 662 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 AKAP3O75969 853 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 H2AFZP0C0S5 128 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 CRKP46108 304 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 HYIQ5T013 277 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 KCTD1Q719H9 257 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 H2AFVQ71UI9 128 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 ZC3H3Q8IXZ2 948 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 SUPT20HQ8NEM7 779 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 CUL5Q93034 780 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 IKZF4Q9H2S9 585 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 ATP8A1Q9Y2Q0 1164 aa15.36■□□□□ 0.05
CLCNKA-202ENST00000375692 SRRM3A6NNA2 597 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 NFIAQ12857 509 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 PABPC4Q13310 644 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 EDRF1Q3B7T1 1238 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 CDC42EP5Q6NZY7 148 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 NT5DC3Q86UY8 548 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 KDM3AQ9Y4C1 1321 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 MYH7BA7E2Y1 1941 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 F8VZ95 297 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 CHUKO15111 745 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 CLIC2O15247 247 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 FLOT1O75955 427 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 GFPT2O94808 682 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 FGGP02679 453 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 ANKRD20A8PQ5CZ79 823 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 SLFN11Q7Z7L1 901 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 SFR1Q86XK3 245 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 TEKT1Q969V4 418 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 DHX36Q9H2U1 1008 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 SIX2Q9NPC8 291 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 BZW2Q9Y6E2 419 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 KIF13BQ9NQT8 1826 aa15.35■□□□□ 0.05
CLCNKA-202ENST00000375692 NFKBIEO00221 500 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 XRCC5P13010 732 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms