RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PIGOQ8TEQ8 1089 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SEPT8Q92599 483 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 MAP7D2Q96T17 732 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PPP1R16BQ96T49 567 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 RAB34Q9BZG1 259 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ANKEF1Q9NU02 776 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 AKT3Q9Y243 479 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CLIC4Q9Y696 253 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 KAT6AQ92794 2004 aa23.45■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SCN5AQ14524 2016 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ABHD14A-ACY1A0A1B0GW23 586 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PP2D1A8MPX8 630 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 GPR32O75388 356 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 BAIAP3O94812 1187 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 BMP15O95972 392 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 XRCC6P12956 609 aaKnown RBP eCLIP23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PDIA4P13667 645 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CCT6AP40227 531 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 IKBKEQ14164 716 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 DHX33Q9H6R0 707 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 AGO3Q9H9G7 860 aaKnown RBP23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 GINS2Q9Y248 185 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SQORQ9Y6N5 450 aa23.44■■□□□ 1.34
MAP1LC3A-202ENST00000374837 MYH9P35579 1960 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 GRXCR1A8MXD5 290 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CDC25AP30304 524 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 NLRP11P59045 1033 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ECM1Q16610 540 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 KIZQ2M2Z5 673 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 FOXD4L5Q5VV16 416 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 HAUS3Q68CZ6 603 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 FOXD4L4Q8WXT5 416 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 NACC1Q96RE7 527 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 JPH2Q9BR39 696 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 COL25A1Q9BXS0 654 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 IFIH1Q9BYX4 1025 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 STK24Q9Y6E0 443 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 TANC1Q9C0D5 1861 aa23.43■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ZSCAN22P10073 491 aaPredicted RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 RFC5P40937 340 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 DNM2P50570 870 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CRYBB1P53674 252 aaPredicted RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 POLGP54098 1239 aaPredicted RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 WDR5P61964 334 aaKnown RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SMAD3P84022 425 aaKnown RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 BECN1Q14457 450 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PTPAQ15257 358 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 POTEGQ6S5H5 508 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 TSHZ1Q6ZSZ6 1077 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 EXOC8Q8IYI6 725 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 USP38Q8NB14 1042 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SNX29Q8TEQ0 813 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SLC7A3Q8WY07 619 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 APBB2Q92870 758 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ADAMTS10Q9H324 1103 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 SUCLA2Q9P2R7 463 aaPredicted RBP23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 UNC80Q8N2C7 3258 aa23.42■■□□□ 1.34
MAP1LC3A-202ENST00000374837 MUTP22033 750 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CD52P31358 61 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 RARRES1P49788 294 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PKP1Q13835 747 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 KRT79Q5XKE5 535 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 TMEM40Q8WWA1 233 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ZNF668Q96K58 619 aaPredicted RBP23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 OSMRQ99650 979 aa23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 MMTAG2Q9BU76 263 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 BMP2KQ9NSY1 1161 aaPredicted RBP23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 NOC2LQ9Y3T9 749 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3A-202ENST00000374837 EFCAB14O75071 495 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ATP2A2P16615 1042 aaKnown RBP23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 KCNJ6P48051 423 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 GPC3P51654 580 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 CEBPZQ03701 1054 aaKnown RBP23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 EMC2Q15006 297 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 ZNF710Q8N1W2 664 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 TET1Q8NFU7 2136 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PHOSPHO2Q8TCD6 241 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 TMEM143Q96AN5 459 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 USP28Q96RU2 1077 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 DBR1Q9UK59 544 aaKnown RBP23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 PADI3Q9ULW8 664 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 KIAA1024Q9UPX6 916 aa23.4■■□□□ 1.34
MAP1LC3A-202ENST00000374837 DEFB103AP81534 67 aa23.39■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CCDC43Q96MW1 224 aaKnown RBP23.39■■□□□ 1.33
MAP1LC3A-202ENST00000374837 SLC9A7Q96T83 725 aa23.39■■□□□ 1.33
MAP1LC3A-202ENST00000374837 XPNPEP1Q9NQW7 623 aa23.39■■□□□ 1.33
MAP1LC3A-202ENST00000374837 WDR81Q562E7 1941 aa23.39■■□□□ 1.33
MAP1LC3A-202ENST00000374837 RPS6KA5O75582 802 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DGAT1O75907 488 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 F13A1P00488 732 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CDC42EP1Q00587 391 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 GRIN1Q05586 938 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PAK2Q13177 524 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 RHPN2Q8IUC4 686 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MTRQ99707 1265 aa23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DDX19AQ9NUU7 478 aaKnown RBP23.38■■□□□ 1.33
MAP1LC3A-202ENST00000374837 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 GAS2O43903 313 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms