RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PICK1Q9NRD5 415 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 GID8Q9NWU2 228 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 CPSF1Q10570 1443 aaKnown RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 YEATS2Q9ULM3 1422 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 KRT16P08779 473 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 EEF1B2P24534 225 aaKnown RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 ZAP70P43403 619 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 TNNI2P48788 182 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 STAT2P52630 851 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 CCDC15Q0P6D6 951 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 LRRC74BQ6ZQY2 392 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 PDZD8Q8NEN9 1154 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 MT-ND3P03897 115 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 KCNMA1Q12791 1236 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 ADAM9Q13443 819 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 C16orf72Q14CZ0 275 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 RARS2Q5T160 578 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TMEM139Q8IV31 216 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 NRBF2Q96F24 287 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ZNF184Q99676 751 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 THTPAQ9BU02 230 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ASCC2Q9H1I8 757 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 MAGEF1Q9HAY2 307 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 RSPH10B2B2RC85 870 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 RSPH10BP0C881 870 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 NEK2P51955 445 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 MRPS15P82914 257 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 AMPD2Q01433 879 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 KDSRQ06136 332 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 DNAJC3Q13217 504 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 GCKRQ14397 625 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 KYNUQ16719 465 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TRIM16LQ309B1 348 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 CCT6BQ92526 530 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TTC17Q96AE7 1141 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 XAGE2Q96GT9 111 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 EBF2Q9HAK2 575 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ZNF180Q9UJW8 692 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 FBXO2Q9UK22 296 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 PCDHB13Q9Y5F0 798 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 MADDQ8WXG6 1647 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 G3V3G9 751 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 BCRP11274 1271 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 IGBP1P78318 339 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 DHX34Q14147 1143 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 HIC1Q14526 733 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ZNF772Q68DY9 489 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 PPP2R3CQ969Q6 453 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ACSBG1Q96GR2 724 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 INTS13Q9NVM9 706 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 COL4A3BPQ9Y5P4 624 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 RBM47A0AV96 593 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 B2RBV5 119 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 INHBAP08476 426 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 PLS3P13797 630 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 GFAPP14136 432 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 FDPSP14324 419 aaKnown RBP10.97□□□□□ -0.65
CD28-202ENST00000374481 TRAPPC10P48553 1259 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 FAM83BQ5T0W9 1011 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TRIM50Q86XT4 487 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 TMEM237Q96Q45 408 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 SERPINI1Q99574 410 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 DNAJC7Q99615 494 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ARMT1Q9H993 441 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 CEP72Q9P209 647 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 ABCC12Q96J65 1359 aa10.97□□□□□ -0.65
CD28-202ENST00000374481 SH2B2O14492 632 aaPredicted RBP10.96□□□□□ -0.65
CD28-202ENST00000374481 SNX3O60493 162 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 EPHB2P29323 1055 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 CHRNA3P32297 505 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 ARHGAP4P98171 946 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 IQCKQ8N0W5 287 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 CCT7Q99832 543 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.65
CD28-202ENST00000374481 KLHL25Q9H0H3 589 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 PREBQ9HCU5 417 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 DDX28Q9NUL7 540 aaKnown RBP10.96□□□□□ -0.65
CD28-202ENST00000374481 HPSEQ9Y251 543 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 CDH16O75309 829 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 FAM13AO94988 1023 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 PTPN4P29074 926 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 NCALDP61601 193 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms