RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 EHHADHQ08426 723 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 IFFO1Q0D2I5 559 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 MICAL1Q8TDZ2 1067 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 JMJD4Q9H9V9 463 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 TMBIM4Q9HC24 238 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 LY75O60449 1722 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 PKN1Q16512 942 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 SYCP3Q8IZU3 236 aa12.16□□□□□ -0.46
RPRD1B-201ENST00000373433 EPHB6O15197 1021 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 RAD51CO43502 376 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 EPHX2P34913 555 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 IRX1P78414 480 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 PDE4DQ08499 809 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 IL17AQ16552 155 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 TTI2Q6NXR4 508 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ZNF572Q7Z3I7 529 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 FEM1BQ9UK73 627 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 PRR12Q9ULL5 1215 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ATP6V1G2O95670 118 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 HSD17B3P37058 310 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 GABPAQ06546 454 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 CABP7Q86V35 215 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 RNF217Q8TC41 542 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 RAVER2Q9HCJ3 691 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 PALMO75781 387 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 MAGOHP61326 146 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 NLRC4Q9NPP4 1024 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-201ENST00000373433 ENO4A6NNW6 628 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 PPP2R2AP63151 447 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 TNNC1P63316 161 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 CD302Q8IX05 232 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 CCDC63Q8NA47 563 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ARMC2Q8NEN0 867 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 P2RX5Q93086 422 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 MPHOSPH6Q99547 160 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ANO3Q9BYT9 981 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ELP3Q9H9T3 547 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 EIF4E1BA6NMX2 242 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 STXBP3O00186 592 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 TAF4BQ92750 862 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 SPATS2LQ9NUQ6 558 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 EGFRP00533 1210 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ELF3P78545 371 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 FAM133BQ5BKY9 247 aaKnown RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 ASTN2O75129 1339 aaPredicted RBP12.14□□□□□ -0.47
RPRD1B-201ENST00000373433 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 MREGQ8N565 214 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 LPAR1Q92633 364 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 MYH6P13533 1939 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 CYTH3O43739 400 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms