RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
CSMD2-205ENST00000373381 ATXN3P54252 364 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ARHGEF7Q14155 803 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 IARS2Q9NSE4 1012 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 HSPA2P54652 639 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 TEX2Q8IWB9 1127 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ASNSD1Q9NWL6 643 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 IQCA1LA6NCM1 817 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 HIST1H2AGP0C0S8 130 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CPB1P15086 417 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 VCLP18206 1134 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 HIST1H2ADP20671 130 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 UBXN2AP68543 259 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 MB21D1Q8N884 522 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 RMDN1Q96DB5 314 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 HIST1H2AHQ96KK5 128 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 HIST1H2AJQ99878 128 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 H2AFJQ9BTM1 129 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ANXA11P50995 505 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 MTX1Q13505 466 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CDO1Q16878 200 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 FAM47AQ5JRC9 791 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 SCARA5Q6ZMJ2 495 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 PIK3R2O00459 728 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 KRT20P35900 424 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 IDI1Q13907 227 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 EFTUD2Q15029 972 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ALS2CLQ60I27 953 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ST13P4Q8IZP2 240 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 KANSL2Q9H9L4 492 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 GTSE1Q9NYZ3 720 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 FBXO40Q9UH90 709 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 SPAG7O75391 227 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 C10orf53Q8N6V4 93 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CFAP99D6REC4 459 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 AFPP02771 609 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 PLS3P13797 630 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CD58P19256 250 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CUL4AQ13619 759 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 LAMB3Q13751 1172 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 RTKN2Q8IZC4 609 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 PPP1R16BQ96T49 567 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 NCOA5Q9HCD5 579 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CDH2P19022 906 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 TBL3Q12788 808 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 SNX17Q15036 470 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 TUBGCP2Q9BSJ2 902 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 KRT38O76015 456 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 MTERF2Q49AM1 385 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 AP1ARQ63HQ0 302 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 PRRG1O14668 218 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 SLC27A2O14975 620 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 XDHP47989 1333 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 RLBP1P12271 317 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 GPR1P46091 355 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 ST13P50502 369 aaKnown RBP9.69□□□□□ -0.86
CSMD2-205ENST00000373381 CEP78Q5JTW2 689 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 KIAA1024Q9UPX6 916 aa9.69□□□□□ -0.86
CSMD2-205ENST00000373381 AKT1P31749 480 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CEP55Q53EZ4 464 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CLYBLQ8N0X4 340 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 PARVBQ9HBI1 364 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ABI2Q9NYB9 513 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC90BQ9GZT6 254 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 IPPQ9Y573 584 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ATRXP46100 2492 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 NR2F2P24468 414 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC142Q17RM4 750 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 STKLD1Q8NE28 680 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CSE1LP55060 971 aaKnown RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 GNGT1P63211 74 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 GCKRQ14397 625 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 RAPGEF5Q92565 580 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 SLC25A13Q9UJS0 675 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 OSTNP61366 133 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 KYAT1Q16773 422 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 FBXL5Q9UKA1 691 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 APOBEC2Q9Y235 224 aaKnown RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 K7ERI5 159 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 BIRC5O15392 142 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 NR1H3Q13133 447 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 FAM26FQ5R3K3 315 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 BRIP1Q9BX63 1249 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 COPB2P35606 906 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms