RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 TIMP1P01033 207 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SPATA31C1P0DKV0 1188 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 HOXC8P31273 242 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SFNP31947 248 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 ATP2C1P98194 919 aaPredicted RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SNW1Q13573 536 aaKnown RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 GPNMBQ14956 572 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 MTERF2Q49AM1 385 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 ZNF618Q5T7W0 954 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 USP49Q70CQ1 688 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SERINC5Q86VE9 423 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SESTD1Q86VW0 696 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 METTL13Q8N6R0 699 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 ENGASEQ8NFI3 743 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 CLIC6Q96NY7 704 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 NAP1L4Q99733 375 aaKnown RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SUGCTQ9HAC7 445 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 SEPT9Q9UHD8 586 aaPredicted RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 NRCAMQ92823 1304 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 KIAA0355O15063 1070 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 TLR3O15455 904 aaKnown RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 OATP04181 439 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 TPM2P07951 284 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 CKBP12277 381 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 QARSP47897 775 aaKnown RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 CLCN3P51790 818 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 MBTPS1Q14703 1052 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 C9orf50Q5SZB4 431 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
TMEM254-201ENST00000372273 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
TMEM254-201ENST00000372273 A0A1B0GVL5 298 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 BECN2A8MW95 431 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 CSDE1O75534 798 aaKnown RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 P4HBP07237 508 aaKnown RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 PSMC5P62195 406 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 PTPAQ15257 358 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 EPHA7Q15375 998 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 TRIM71Q2Q1W2 868 aaKnown RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 DTHD1Q6ZMT9 781 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 DRC7Q8IY82 874 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 SPC24Q8NBT2 197 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 LRWD1Q9UFC0 647 aa10.66□□□□□ -0.7
TMEM254-201ENST00000372273 TRIP12Q14669 1992 aaPredicted RBP10.66□□□□□ -0.7
TMEM254-201ENST00000372273 MBLAC1A4D2B0 266 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 AP5Z1O43299 807 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 HBP1O60381 514 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 VTNP04004 478 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 YWHABP31946 246 aaKnown RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 TERF1P54274 439 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 TCTN1Q2MV58 587 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 DNTTIP2Q5QJE6 756 aaKnown RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 MAEAQ7L5Y9 396 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 OTOP2Q7RTS6 562 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 IGSF22Q8N9C0 903 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 GDF15Q99988 308 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 MMTAG2Q9BU76 263 aaKnown RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 NBNO60934 754 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 PPP6R2O75170 966 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 C22orf31O95567 290 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 CHRNA1P02708 482 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 SLC26A2P50443 739 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 SLC39A14Q15043 492 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 AXDND1Q5T1B0 1012 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 MFSD5Q6N075 450 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 KCNK18Q7Z418 384 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 KSR1Q8IVT5 923 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 KIAA0319LQ8IZA0 1049 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 EPSTI1Q96J88 318 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 CEP170P1Q96L14 293 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 ZNF830Q96NB3 372 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 CEP89Q96ST8 783 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
TMEM254-201ENST00000372273 R3HCC1Q9Y3T6 440 aaKnown RBP10.65□□□□□ -0.7
TMEM254-201ENST00000372273 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM254-201ENST00000372273 NDUFA8P51970 172 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
TMEM254-201ENST00000372273 PTK7Q13308 1070 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 SHHQ15465 462 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 KIZQ2M2Z5 673 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 TMEM266Q2M3C6 531 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 EFCAB12Q6NXP0 572 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 LRRC15Q8TF66 581 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 TMEM143Q96AN5 459 aa10.64□□□□□ -0.71
TMEM254-201ENST00000372273 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
TMEM254-201ENST00000372273 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms