RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CREG2Q8IUH2 290 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 C4orf32Q8N8J7 132 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 TACO1Q9BSH4 297 aaKnown RBP12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 GDAQ9Y2T3 454 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 FAM169AQ9Y6X4 670 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 STXBP3O00186 592 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 KLRC4O43908 158 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 HSF2BPO75031 334 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 COBLO75128 1261 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 HOXA13P31271 388 aaPredicted RBP12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 NLRP5P59047 1200 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 MAP2K5Q13163 448 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 GRB14Q14449 540 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 IL17AQ16552 155 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 MICALCLQ6ZW33 695 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 CD302Q8IX05 232 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 TUBGCP2Q9BSJ2 902 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 CYP39A1Q9NYL5 469 aa12.57□□□□□ -0.4
TSPAN1-201ENST00000372003 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 SMCO2A6NFE2 343 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PDE2AO00408 941 aaPredicted RBP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 WNT7AO00755 349 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 OPLAHO14841 1288 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PJA2O43164 708 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 SRGAP2O75044 1071 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 GNRH1P01148 92 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 CCT5P48643 541 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 RPS6P62753 249 aaKnown RBP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 CNTN2Q02246 1040 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 FKBP15Q5T1M5 1219 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 FOXR2Q6PJQ5 311 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 CTU1Q7Z7A3 348 aaKnown RBP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 MREGQ8N565 214 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 RNF10Q8N5U6 811 aaKnown RBP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 EIF1ADQ8N9N8 165 aaKnown RBP12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 AK8Q96MA6 479 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 RUFY1Q96T51 708 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 LACRTQ9GZZ8 138 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PLAGL2Q9UPG8 496 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 A0A0G2JMZ2 1700 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 PARP14Q460N5 1801 aa12.56□□□□□ -0.4
TSPAN1-201ENST00000372003 GCOM1H8Y6P7 765 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 POLR2MP0CAP2 368 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 MYBL2P10244 700 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 RGS2P41220 211 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 GNGT1P63211 74 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 CNPY4Q8N129 248 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 STAMQ92783 540 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 P2RX5Q93086 422 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 PFASO15067 1338 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 MCM7P33993 719 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 C2orf54Q08AI8 447 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 CCL14Q16627 93 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 UBE2SQ16763 222 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 NAALADL2Q58DX5 795 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 KDM7AQ6ZMT4 941 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 BLIDQ8IZY5 108 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 CSGALNACT2Q8N6G5 542 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 SYTL5Q8TDW5 730 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 RIN2Q8WYP3 895 aaPredicted RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 USP6NLQ92738 828 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 CUL5Q93034 780 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 STIM2Q9P246 746 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms