RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LSP1P33241 339 aa16.27■□□□□ 0.19
COL5A1-201ENST00000371817 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.19
COL5A1-201ENST00000371817 FAF2Q96CS3 445 aa16.27■□□□□ 0.19
COL5A1-201ENST00000371817 GMEB1Q9Y692 573 aa16.27■□□□□ 0.19
COL5A1-201ENST00000371817 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 LARP4BQ92615 738 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 AK8Q96MA6 479 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 TYW5A2RUC4 315 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 PARD3BQ8TEW8 1205 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 GOLPH3LQ9H4A5 285 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 FANCEQ9HB96 536 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 EML4Q9HC35 981 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 PRDM1O75626 825 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 TRIM49P0CI25 452 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 TRIM49CP0CI26 452 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 IMPDH2P12268 514 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 THAP9Q9H5L6 903 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 IGF1RP08069 1367 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 XPO1O14980 1071 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 MFAP3LO75121 409 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 NUP107P57740 925 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 TBC1D9BQ66K14 1250 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 SNX2O60749 519 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 NR5A1Q13285 461 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 TRIM45Q9H8W5 580 aaPredicted RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 MED7O43513 233 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 MRPS25P82663 173 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 OLFML1Q6UWY5 402 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 EXT2Q93063 718 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 PPP4R4Q6NUP7 873 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 CMTM5Q96DZ9 223 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 MRPL1Q9BYD6 325 aaKnown RBP16.26■□□□□ 0.19
COL5A1-201ENST00000371817 ABHD10Q9NUJ1 306 aa16.26■□□□□ 0.19
COL5A1-201ENST00000371817 ABL1P00519 1130 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ARMCX4Q5H9R4 360 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 C16orf89Q6UX73 402 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 RGS5O15539 181 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SLC9A5Q14940 896 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SLC39A14Q15043 492 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 LVRNQ6Q4G3 990 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 OTULINQ96BN8 352 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SLC40A1Q9NP59 571 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ASNA1O43681 348 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 INPP5FQ9Y2H2 1132 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 DTNBO60941 627 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 COBLO75128 1261 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 THTPAQ9BU02 230 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SLC13A1Q9BZW2 595 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SCN3BQ9NY72 215 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 PIK3C2GO75747 1445 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 GOLGA8MH3BSY2 632 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 FMNL1O95466 1100 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 TP53BP2Q13625 1128 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ADRM1Q16186 407 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SARM1Q6SZW1 724 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ZBTB8OSQ8IWT0 167 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 GALNT4Q8N4A0 578 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 NOD2Q9HC29 1040 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 NPHS2Q9NP85 383 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 ATAD3AQ9NVI7 634 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 UBE4BO95155 1302 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 LRRC14Q15048 493 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 FOXP1Q9H334 677 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-201ENST00000371817 CD248Q9HCU0 757 aa16.25■□□□□ 0.19
COL5A1-201ENST00000371817 M0QZ92 97 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 SCG3Q8WXD2 468 aaKnown RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 ZNF556Q9HAH1 456 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 MRGBPQ9NV56 204 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 SGSM3Q96HU1 749 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 NOD1Q9Y239 953 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 PTPREP23469 700 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 PLEKHA7Q6IQ23 1121 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KCNK16Q96T55 309 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KDM4CQ9H3R0 1056 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 TAF4O00268 1085 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 CYP27A1Q02318 531 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 BTKQ06187 659 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 TRIP10Q15642 601 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 MFSD4BQ5TF39 518 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 RTL3Q8N8U3 475 aaKnown RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 ATP8A2Q9NTI2 1148 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms